RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PTRHD1Q6GMV3 140 aaKnown RBP20.68■□□□□ 0.9
SND1-214ENST00000489417 KIAA1161Q6NSJ0 714 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 LVRNQ6Q4G3 990 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 LCA5Q86VQ0 697 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 GJD3Q8N144 294 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 PLD6Q8N2A8 252 aaKnown RBP20.68■□□□□ 0.9
SND1-214ENST00000489417 DDHD1Q8NEL9 900 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 GDAP1Q8TB36 358 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 BTN2A2Q8WVV5 523 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 GLYATL1Q969I3 302 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 CENPTQ96BT3 561 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 TSNARE1Q96NA8 513 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 FAM111AQ96PZ2 611 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 C1QTNF1Q9BXJ1 281 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 CAPS2Q9BXY5 557 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 ZFR2Q9UPR6 939 aaKnown RBP20.68■□□□□ 0.9
SND1-214ENST00000489417 MED16Q9Y2X0 877 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 PRSS21Q9Y6M0 314 aa20.68■□□□□ 0.9
SND1-214ENST00000489417 PLXNB3Q9ULL4 1909 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 LRRK1Q38SD2 2015 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 H3BMM5 538 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 RNGTTO60942 597 aaKnown RBP20.67■□□□□ 0.9
SND1-214ENST00000489417 NIPSNAP2O75323 286 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 WISP3O95389 354 aaPredicted RBP20.67■□□□□ 0.9
SND1-214ENST00000489417 ASMTLO95671 621 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 PYGLP06737 847 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 AKT1P31749 480 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 GPR1P46091 355 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 RPS21P63220 83 aaKnown RBP20.67■□□□□ 0.9
SND1-214ENST00000489417 PDAP1Q13442 181 aaKnown RBP20.67■□□□□ 0.9
SND1-214ENST00000489417 AGERQ15109 404 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 LDLRAP1Q5SW96 308 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 N4BP2L1Q5TBK1 243 aaPredicted RBP20.67■□□□□ 0.9
SND1-214ENST00000489417 RAET1GQ6H3X3 334 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 KYAT3Q6YP21 454 aaKnown RBP20.67■□□□□ 0.9
SND1-214ENST00000489417 MACC1Q6ZN28 852 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 TBC1D1Q86TI0 1168 aaPredicted RBP20.67■□□□□ 0.9
SND1-214ENST00000489417 FAM124AQ86V42 546 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 KCTD4Q8WVF5 259 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 KCNJ9Q92806 393 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 DCUN1D1Q96GG9 259 aa20.67■□□□□ 0.9
SND1-214ENST00000489417 A0A1W2PQU0 124 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 PRR23AA6NEV1 266 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 CFAP99D6REC4 459 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 E5RI56 91 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 SOD1P00441 154 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 ETV4P43268 484 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 TPMTP51580 245 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 B4GALNT1Q00973 533 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 TMEM259Q4ZIN3 620 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 TTC19Q6DKK2 380 aaPredicted RBP20.66■□□□□ 0.9
SND1-214ENST00000489417 C16orf46Q6P387 395 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 NEK5Q6P3R8 708 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 CENPLQ8N0S6 344 aaPredicted RBP20.66■□□□□ 0.9
SND1-214ENST00000489417 PELI3Q8N2H9 469 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 PGBD3Q8N328 593 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 CLDN19Q8N6F1 224 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 TSTD1Q8NFU3 115 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 HEXDCQ8WVB3 486 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 DYDC1Q8WWB3 177 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 GPR21Q99679 349 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 PAIP2Q9BPZ3 127 aaKnown RBP20.66■□□□□ 0.9
SND1-214ENST00000489417 OSBPL6Q9BZF3 934 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 KDM4CQ9H3R0 1056 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 ZNF358Q9NW07 568 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 C2orf42Q9NWW7 574 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 TMEM216Q9P0N5 145 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 EMCNQ9ULC0 261 aa20.66■□□□□ 0.9
SND1-214ENST00000489417 OAS3Q9Y6K5 1087 aaKnown RBP20.66■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3DA0A087WVF3 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3IA0A087WXS9 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3EA0A087X179 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3KA0A087X1G2 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3FA6NER0 549 aaPredicted RBP20.65■□□□□ 0.9
SND1-214ENST00000489417 A6NNZ2 444 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3LB9A6J9 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 K7ESM1 405 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 STK25O00506 426 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 PLIN3O60664 434 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 DNAJC6O75061 913 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 KLHL2O95198 593 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 SLC34A2O95436 690 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3HP0C7X1 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 RALBP11234 206 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 CHRM3P20309 590 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 MSH3P20585 1137 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 SLC26A3P40879 764 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 GNGT1P63211 74 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 IL9RQ01113 521 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TSNAXIP1Q2TAA8 658 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TUBB8Q3ZCM7 444 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3GQ6DHY5 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3CQ6IPX1 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TMEM207Q6UWW9 146 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TAX1BP1Q86VP1 789 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 HORMAD1Q86X24 394 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 PHYKPLQ8IUZ5 450 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 SPNS2Q8IVW8 549 aa20.65■□□□□ 0.9
SND1-214ENST00000489417 TBC1D3Q8IZP1 549 aaPredicted RBP20.65■□□□□ 0.9
SND1-214ENST00000489417 PJA1Q8NG27 643 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 257.7 ms