RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 MBD3L4A6NDZ8 208 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 GOLGA6L9A6NEM1 432 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 MBD3L5A6NJ08 208 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 FIGNL2A6NMB9 653 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 CACNB4O00305 520 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 O00370 1275 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 ZSCAN12O43309 604 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 SMAD6O43541 496 aaKnown RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 ZNF821O75541 412 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 KLF7O75840 302 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 STAU1O95793 577 aaKnown RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 TSPAN12O95859 305 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 LTFP02788 710 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 KLK3P07288 261 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 SPTBP11277 2137 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 PVRP15151 417 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 KELP23276 732 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 RRM1P23921 792 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 EEF1GP26641 437 aaKnown RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 HADHAP40939 763 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 PRCPP42785 496 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 MAPK9P45984 424 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 TNFSF10P50591 281 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 CACNG1Q06432 222 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 MFAP5Q13361 173 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 PEX6Q13608 980 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 SSPNQ14714 243 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 NCF4Q15080 339 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 MYLK3Q32MK0 819 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 HSP90AA4PQ58FG1 418 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 PLEKHS1Q5SXH7 462 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 TMCO4Q5TGY1 634 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 CDKAL1Q5VV42 579 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 LIPNQ5VXI9 398 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 C22orf39Q6P5X5 142 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 PRSS42Q7Z5A4 293 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 FGD2Q7Z6J4 655 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 BPHLQ86WA6 291 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 PAQR7Q86WK9 346 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 CREBRFQ8IUR6 639 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 SMYD4Q8IYR2 804 aaPredicted RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 DEPDC4Q8N2C3 294 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 SFRP1Q8N474 314 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 MAPK1IP1LQ8NDC0 245 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 OR52K2Q8NGK3 314 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 CXorf40AQ8TE69 158 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 KLHL6Q8WZ60 621 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 RAD54LQ92698 747 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 VOPP1Q96AW1 172 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 TSG101Q99816 390 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 HSD3B7Q9H2F3 369 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 TNKS2Q9H2K2 1166 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 THAP9Q9H5L6 903 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 CARS2Q9HA77 564 aaKnown RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 SAMSN1Q9NSI8 373 aaKnown RBP7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 HMGXB4Q9UGU5 601 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 OR51B4Q9Y5P0 310 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 ANKRD12Q6UB98 2062 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 NPHP3-ACAD11A0A0J9YXS1 232 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 AKR1B15C9JRZ8 316 aaPredicted RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 MEN1O00255 615 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 PES1O00541 588 aaKnown RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 DNAJB6O75190 326 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 SCRG1O75711 98 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 SOX30O94993 753 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 PCCBP05166 539 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 KRT18P05783 430 aaKnown RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 HOXC4P09017 264 aaPredicted RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 TNNT1P13805 278 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 FOLR1P15328 257 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 ABOP16442 354 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 NELFEP18615 380 aaKnown RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 ABCD1P33897 745 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 RORAP35398 523 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 COMPP49747 757 aaPredicted RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 SMCPP49901 116 aaPredicted RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 CTSCP53634 463 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 CCZ1BP86790 482 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 CCZ1P86791 482 aaPredicted RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 HHEXQ03014 270 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 MCM6Q14566 821 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 NR1I3Q14994 352 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 DUOXA2Q1HG44 320 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 PLA2G4EQ3MJ16 856 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 TMEM119Q4V9L6 283 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 FLYWCH1Q4VC44 716 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 KRTCAP3Q53RY4 240 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 COBLL1Q53SF7 1204 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 TCP11X2Q5H9J9 407 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 RAB41Q5JT25 222 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 PRAMEF13Q5VWM6 474 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 FBXW10Q5XX13 1052 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 UNC13DQ70J99 1090 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 TRAPPC11Q7Z392 1133 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 PPP1R32Q7Z5V6 425 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 CNGA4Q8IV77 575 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 CHERPQ8IWX8 916 aaKnown RBP7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 CCDC65Q8IXS2 484 aa7.34□□□□□ -1.23
EXOSC3-206ENST00000489414 CCAR2Q8N163 923 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms