RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 C9orf172C9J069 976 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 K7ENP7 123 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 APOC4-APOC2K7ER74 178 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 TK2O00142 265 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 MTX2O75431 263 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 IPO7O95373 1038 aaKnown RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 APOC2P02655 101 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 GPR89BP0CG08 455 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 THRAP10827 490 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 LIPCP11150 499 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 CCL4P13236 92 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 F3P13726 295 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 SLC2A4P14672 509 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 MPSTP25325 297 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 CHRNA4P43681 627 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 TNNT3P45378 269 aaPredicted RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 PPM1FP49593 454 aaPredicted RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 RHDQ02161 417 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 NFATC2Q13469 925 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 TRA2AQ13595 282 aaKnown RBP eCLIP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 TGIF1Q15583 401 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 PLA2G4EQ3MJ16 856 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 INO80CQ6PI98 192 aaPredicted RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 LSM14AQ8ND56 463 aaKnown RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 AHCYL2Q96HN2 611 aaKnown RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 PLEKHG4BQ96PX9 1271 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 CCNL2Q96S94 520 aaPredicted RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 DPYSL5Q9BPU6 564 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 OSGEPL1Q9H4B0 414 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 C10orf88Q9H8K7 445 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 KLC4Q9NSK0 619 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 RSPH14Q9UHP6 348 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 REXO2Q9Y3B8 237 aaKnown RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 DUSP10Q9Y6W6 482 aa22.72■■□□□ 1.23
COL9A3-213ENST00000489045 ZNF106Q9H2Y7 1883 aaKnown RBP22.72■■□□□ 1.23
COL9A3-213ENST00000489045 H7C0C1 242 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 ERVH48-1M5A8F1 160 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 CHUKO15111 745 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 DUX1O43812 170 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 EPOP01588 193 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 HMGCLP35914 325 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 ATP5OP48047 213 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 NAP1L1P55209 391 aaKnown RBP22.71■■□□□ 1.23
COL9A3-213ENST00000489045 COPS2P61201 443 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 XRCC4Q13426 336 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 CCDC181Q5TID7 509 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 RAD9BQ6WBX8 426 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 SLC9B2Q86UD5 537 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 ZFAND4Q86XD8 727 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 TTC30BQ8N4P2 665 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 IPMKQ8NFU5 416 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 OR10G6Q8NH81 332 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 CALR3Q96L12 384 aaKnown RBP22.71■■□□□ 1.23
COL9A3-213ENST00000489045 TRABDQ9H4I3 376 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 PRDM8Q9NQV8 689 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 TRHDEQ9UKU6 1024 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 PCDHA3Q9Y5H8 950 aa22.71■■□□□ 1.23
COL9A3-213ENST00000489045 CFAP46Q8IYW2 2715 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 KIR2DS5A0A0G2JLQ3 304 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 A0A0G2JNG1 304 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 MACROD2A1Z1Q3 448 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 KIR2DS3K7RE56 304 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 RBL1P28749 1068 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 CLCNKAP51800 687 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 MPP3Q13368 585 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 KIR2DS5Q14953 304 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 SLC1A5Q15758 541 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 INSCQ1MX18 579 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 ATP13A5Q4VNC0 1218 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 KHDC1Q4VXA5 237 aaKnown RBP22.7■■□□□ 1.22
COL9A3-213ENST00000489045 TMEM71Q6P5X7 295 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 LRRTM4Q86VH4 590 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 ACRBPQ8NEB7 543 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 VPS35Q96QK1 796 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 SLC23A2Q9UGH3 650 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 TMPRSS11EQ9UL52 423 aa22.7■■□□□ 1.22
COL9A3-213ENST00000489045 GCN1Q92616 2671 aaKnown RBP22.7■■□□□ 1.22
COL9A3-213ENST00000489045 OR5K4A6NMS3 321 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 BTNL10A8MVZ5 291 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 KMOO15229 486 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 VEGFDO43915 354 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 FGF3P11487 239 aaPredicted RBP22.69■■□□□ 1.22
COL9A3-213ENST00000489045 ZNF7P17097 686 aaPredicted RBP22.69■■□□□ 1.22
COL9A3-213ENST00000489045 HLA-DPA1P20036 260 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 OTUD4Q01804 1114 aaKnown RBP22.69■■□□□ 1.22
COL9A3-213ENST00000489045 TAF1BQ53T94 588 aaPredicted RBP22.69■■□□□ 1.22
COL9A3-213ENST00000489045 TMEM164Q5U3C3 297 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 GLT6D1Q7Z4J2 308 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 AGBL5Q8NDL9 886 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 ACTL9Q8TC94 416 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 BLOC1S5Q8TDH9 187 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 SH3KBP1Q96B97 665 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 B3GNT4Q9C0J1 378 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 LACRTQ9GZZ8 138 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 GBA3Q9H227 469 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 HACD3Q9P035 362 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 CPNE7Q9UBL6 633 aa22.69■■□□□ 1.22
COL9A3-213ENST00000489045 CCDC66A2RUB6 948 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 PJA2O43164 708 aa22.68■■□□□ 1.22
COL9A3-213ENST00000489045 EFSO43281 561 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms