RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SLC44A1Q8WWI5 657 aa2.33□□□□□ -2.04
CCDC93-209ENST00000488908 OMA1Q96E52 524 aa2.33□□□□□ -2.04
CCDC93-209ENST00000488908 GIMAP5Q96F15 307 aa2.33□□□□□ -2.04
CCDC93-209ENST00000488908 OXNAD1Q96HP4 312 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-209ENST00000488908 PRMT6Q96LA8 375 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-209ENST00000488908 TKTL2Q9H0I9 626 aa2.33□□□□□ -2.04
CCDC93-209ENST00000488908 APOBEC3GQ9HC16 384 aaKnown RBP2.33□□□□□ -2.04
CCDC93-209ENST00000488908 ACSS1Q9NUB1 689 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-209ENST00000488908 SLC38A7Q9NVC3 462 aa2.33□□□□□ -2.04
CCDC93-209ENST00000488908 CLIP2Q9UDT6 1046 aa2.33□□□□□ -2.04
CCDC93-209ENST00000488908 RARRES3Q9UL19 164 aa2.33□□□□□ -2.04
CCDC93-209ENST00000488908 ATRXP46100 2492 aa2.33□□□□□ -2.04
CCDC93-209ENST00000488908 ZNF646O15015 1829 aaPredicted RBP2.33□□□□□ -2.04
CCDC93-209ENST00000488908 KCNN4O15554 427 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 KLK10O43240 276 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 TRMUO75648 421 aaKnown RBP2.32□□□□□ -2.04
CCDC93-209ENST00000488908 MYL1P05976 194 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 ANXA7P20073 488 aaKnown RBP2.32□□□□□ -2.04
CCDC93-209ENST00000488908 MS4A2Q01362 244 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 GRAPQ13588 217 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 FASTKD1Q53R41 847 aaKnown RBP2.32□□□□□ -2.04
CCDC93-209ENST00000488908 ZNF766Q5HY98 468 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 TXNDC8Q6A555 127 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 PACS1Q6VY07 963 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 QSOX2Q6ZRP7 698 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 Q6ZSR9 355 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 ZPLD1Q8TCW7 415 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 RUFY2Q8WXA3 655 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 STAMQ92783 540 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 CYYR1Q96J86 154 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 PRAC1Q96KF2 57 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 RTP3Q9BQQ7 232 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 RHNO1Q9BSD3 238 aa2.32□□□□□ -2.04
CCDC93-209ENST00000488908 IGHV4-4A0A075B6R2 117 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 GOLGA6L10A0A0M3HER8 536 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.31□□□□□ -2.04
CCDC93-209ENST00000488908 VCYO14598 125 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 ANKRD28O15084 1053 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 SEC14L5O43304 696 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 SYNCRIPO60506 623 aaKnown RBP2.31□□□□□ -2.04
CCDC93-209ENST00000488908 TACC1O75410 805 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 AP2A2O94973 939 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 RAF1P04049 648 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 TFAP2AP05549 437 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 UBA7P41226 1012 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 GPD2P43304 727 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 PGFP49763 221 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 TMEM81Q6P7N7 255 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 ISCA2Q86U28 154 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 ANKRD13AQ8IZ07 590 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 Q8N377 158 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 APBB2Q92870 758 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 H2AFJQ9BTM1 129 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 RAB11FIP5Q9BXF6 653 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 LAT2Q9GZY6 243 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 C20orf141Q9NUB4 165 aa2.31□□□□□ -2.04
CCDC93-209ENST00000488908 ABCA7Q8IZY2 2146 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 A0A1W2PP11 408 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 FAM90A26D6RGX4 464 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 TAF4O00268 1085 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 TSPAN3O60637 253 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 CNPP09543 421 aaKnown RBP2.3□□□□□ -2.04
CCDC93-209ENST00000488908 CAPN2P17655 700 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 CBLP22681 906 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 APOBEC1P41238 236 aaKnown RBP2.3□□□□□ -2.04
CCDC93-209ENST00000488908 GABRB2P47870 512 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 TRA2BP62995 288 aaKnown RBP2.3□□□□□ -2.04
CCDC93-209ENST00000488908 COX10Q12887 443 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 MAD2L1Q13257 205 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-209ENST00000488908 KCNC3Q14003 757 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 DUOXA1Q1HG43 343 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 ADCK5Q3MIX3 580 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 C2CD6Q53TS8 623 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 GPRIN3Q6ZVF9 776 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 MYLK4Q86YV6 388 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-209ENST00000488908 CCDC136Q96JN2 1154 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 PAGR1Q9BTK6 254 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 LRRC61Q9BV99 259 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 HEMGNQ9BXL5 484 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 TRIM6Q9C030 488 aaPredicted RBP2.3□□□□□ -2.04
CCDC93-209ENST00000488908 USP44Q9H0E7 712 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 ARNT2Q9HBZ2 717 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 DNAJB4Q9UDY4 337 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 LIMA1Q9UHB6 759 aaKnown RBP2.3□□□□□ -2.04
CCDC93-209ENST00000488908 CEPT1Q9Y6K0 416 aa2.3□□□□□ -2.04
CCDC93-209ENST00000488908 COL4A4P53420 1690 aaPredicted RBP2.29□□□□□ -2.04
CCDC93-209ENST00000488908 UTYO14607 1347 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 ASTN2O75129 1339 aaPredicted RBP2.29□□□□□ -2.04
CCDC93-209ENST00000488908 ABHD14A-ACY1A0A1B0GW23 586 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 IFIT2P09913 472 aaKnown RBP2.29□□□□□ -2.04
CCDC93-209ENST00000488908 VEGFAP15692 232 aaPredicted RBP2.29□□□□□ -2.04
CCDC93-209ENST00000488908 UGT1A1P22309 533 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 USP41Q3LFD5 358 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 TAF1BQ53T94 588 aaPredicted RBP2.29□□□□□ -2.04
CCDC93-209ENST00000488908 C6orf141Q5SZD1 244 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 PAPD4Q6PIY7 484 aaKnown RBP2.29□□□□□ -2.04
CCDC93-209ENST00000488908 TMEM143Q96AN5 459 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 MAGED4Q96JG8 741 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 CHST11Q9NPF2 352 aa2.29□□□□□ -2.04
CCDC93-209ENST00000488908 GEMIN8Q9NWZ8 242 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms