RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 LRIT1Q9P2V4 623 aa12.74□□□□□ -0.37
PHF1-210ENST00000488767 RNF14Q9UBS8 474 aa12.74□□□□□ -0.37
PHF1-210ENST00000488767 FKBPLQ9UIM3 349 aa12.74□□□□□ -0.37
PHF1-210ENST00000488767 WASF3Q9UPY6 502 aa12.74□□□□□ -0.37
PHF1-210ENST00000488767 PRKAB1Q9Y478 270 aa12.74□□□□□ -0.37
PHF1-210ENST00000488767 ARID1BQ8NFD5 2236 aaPredicted RBP12.73□□□□□ -0.37
PHF1-210ENST00000488767 LY6G6EA0A0G2JKS1 128 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 KLHL33A6NCF5 533 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 TMEM8BA6NDV4 472 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 OR5K4A6NMS3 321 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 USP27XA6NNY8 438 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A9O60656 530 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 SNX2O60749 519 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 KCNJ13O60928 360 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 PHF2O75151 1096 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 MTX2O75431 263 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 MT-CO3P00414 261 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 FUCA1P04066 466 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 ZSCAN5DPP0CG00 497 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 ETS1P14921 441 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A6P19224 532 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A1P22309 533 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A4P22310 534 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A3P35503 534 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A5P35504 534 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 PAFAH1B1P43034 410 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 FNTAP49354 379 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 PPM1FP49593 454 aaPredicted RBP12.73□□□□□ -0.37
PHF1-210ENST00000488767 GPR33Q49SQ1 333 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 ZRANB3Q5FWF4 1079 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 GPRC6AQ5T6X5 926 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
PHF1-210ENST00000488767 UNQ6494/PRO21346Q6UXR6 183 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 RBM44Q6ZP01 1051 aaKnown RBP12.73□□□□□ -0.37
PHF1-210ENST00000488767 SNX20Q7Z614 316 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 NRROSQ86YC3 692 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 CACTIN-AS1Q8N1I8 211 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 OR13C4Q8NGS5 318 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 GRAMD1AQ96CP6 724 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
PHF1-210ENST00000488767 COPS8Q99627 209 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 ZMYND15Q9H091 742 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 VPS37BQ9H9H4 285 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A7Q9HAW7 530 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A10Q9HAW8 530 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 UGT1A8Q9HAW9 530 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 KLC4Q9NSK0 619 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 SPATS2LQ9NUQ6 558 aaKnown RBP12.73□□□□□ -0.37
PHF1-210ENST00000488767 NLE1Q9NVX2 485 aaPredicted RBP12.73□□□□□ -0.37
PHF1-210ENST00000488767 PIH1D1Q9NWS0 290 aaKnown RBP12.73□□□□□ -0.37
PHF1-210ENST00000488767 BFARQ9NZS9 450 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 KCNK6Q9Y257 313 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 SAR1BQ9Y6B6 198 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.73□□□□□ -0.37
PHF1-210ENST00000488767 U3KQA8 63 aa12.73□□□□□ -0.37
PHF1-210ENST00000488767 LRP4O75096 1905 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 FAM149AA5PLN7 773 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 PDZK1P1A8MUH7 402 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 F8W8V4 182 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 TMX2-CTNND1H3BSU7 103 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 CHUKO15111 745 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 LDB2O43679 373 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 NOBOXO60393 691 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 ECEL1O95672 775 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 KRT14P02533 472 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 ZNF7P17097 686 aaPredicted RBP12.72□□□□□ -0.37
PHF1-210ENST00000488767 IDSP22304 550 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 ADRA1DP25100 572 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 MC4RP32245 332 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 PPARGP37231 505 aaPredicted RBP12.72□□□□□ -0.37
PHF1-210ENST00000488767 COILP38432 576 aaPredicted RBP12.72□□□□□ -0.37
PHF1-210ENST00000488767 VPS41P49754 854 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 GPS1Q13098 491 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 TARDBPQ13148 414 aaKnown RBP eCLIP12.72□□□□□ -0.37
PHF1-210ENST00000488767 MSLNQ13421 630 aaPredicted RBP12.72□□□□□ -0.37
PHF1-210ENST00000488767 HLTFQ14527 1009 aaKnown RBP eCLIP12.72□□□□□ -0.37
PHF1-210ENST00000488767 PTPRCAPQ14761 206 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 PPP1R7Q15435 360 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 TRIP13Q15645 432 aaPredicted RBP12.72□□□□□ -0.37
PHF1-210ENST00000488767 PLA2G4EQ3MJ16 856 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 PERM1Q5SV97 790 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 ZNF648Q5T619 568 aaPredicted RBP12.72□□□□□ -0.37
PHF1-210ENST00000488767 ARMC3Q5W041 872 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 TAS2R42Q7RTR8 314 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 PRUNE1Q86TP1 453 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 SLC9B2Q86UD5 537 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 CCNJLQ8IV13 435 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 TRIM48Q8IWZ4 208 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 DCBLD1Q8N8Z6 715 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 PTCD2Q8WV60 388 aaKnown RBP12.72□□□□□ -0.37
PHF1-210ENST00000488767 SH3KBP1Q96B97 665 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 NXPE2Q96DL1 559 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 DNAJC1Q96KC8 554 aaKnown RBP12.72□□□□□ -0.37
PHF1-210ENST00000488767 RUNDC3BQ96NL0 473 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 KCTD3Q9Y597 815 aa12.72□□□□□ -0.37
PHF1-210ENST00000488767 CHD8Q9HCK8 2581 aa12.71□□□□□ -0.37
PHF1-210ENST00000488767 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.71□□□□□ -0.37
PHF1-210ENST00000488767 KIR2DS5A0A0G2JLQ3 304 aa12.71□□□□□ -0.37
PHF1-210ENST00000488767 A0A0G2JNG1 304 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms