RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CYB5D1Q6P9G0 228 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 TP53I13Q8NBR0 393 aaPredicted RBP19.23■□□□□ 0.67
CCM2-216ENST00000488727 TMEM145Q8NBT3 493 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 DTD2Q96FN9 168 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 CD84Q9UIB8 345 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 PILRBQ9UKJ0 227 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 DMTF1Q9Y222 760 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 BPTFQ12830 3046 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 HNRNPA2B1P22626 353 aaKnown RBP19.22■□□□□ 0.67
CCM2-216ENST00000488727 ALDH3A1P30838 453 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 HMGCLP35914 325 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 POU6F1Q14863 301 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 WSCD2Q2TBF2 565 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 CYP2U1Q7Z449 544 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 BRSK1Q8TDC3 778 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 SLC6A18Q96N87 628 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 FAM111AQ96PZ2 611 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 PHOX2BQ99453 314 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 ZNF106Q9H2Y7 1883 aaKnown RBP19.22■□□□□ 0.67
CCM2-216ENST00000488727 MBNL1Q9NR56 388 aaKnown RBP19.22■□□□□ 0.67
CCM2-216ENST00000488727 RAB23Q9ULC3 237 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 KCTD3Q9Y597 815 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 LDB2O43679 373 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 EPN2O95208 641 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 TROVE2P10155 538 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCM2-216ENST00000488727 NUDT1P36639 197 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 SPINT3P49223 89 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 PTPRCAPQ14761 206 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 SETDB1Q15047 1291 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 IRF4Q15306 451 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 TAF1AQ15573 450 aaPredicted RBP19.22■□□□□ 0.67
CCM2-216ENST00000488727 PEAR1Q5VY43 1037 aaPredicted RBP19.22■□□□□ 0.67
CCM2-216ENST00000488727 LAIR1Q6GTX8 287 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 PELI3Q8N2H9 469 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 PIGKQ92643 395 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 NUS1Q96E22 293 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 LOXL4Q96JB6 756 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 LENG8Q96PV6 779 aaPredicted RBP19.22■□□□□ 0.67
CCM2-216ENST00000488727 IQCGQ9H095 443 aaKnown RBP19.22■□□□□ 0.67
CCM2-216ENST00000488727 BPIFA1Q9NP55 256 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCM2-216ENST00000488727 PLLPQ9Y342 182 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 PI4KAP42356 2102 aa19.22■□□□□ 0.67
CCM2-216ENST00000488727 PRAMEF26H0Y7S4 382 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 H0Y8X5 98 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 UGT1A9O60656 530 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 TGDSO95455 350 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 MGAT1P26572 445 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 IGFALSP35858 605 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 SERPINB4P48594 390 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 CLDN2P57739 230 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 SESN2P58004 480 aaPredicted RBP19.21■□□□□ 0.67
CCM2-216ENST00000488727 NHLH1Q02575 133 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 FRG1Q14331 258 aaKnown RBP19.21■□□□□ 0.67
CCM2-216ENST00000488727 GCNT7Q6ZNI0 430 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 SYT12Q8IV01 421 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 TRIM42Q8IWZ5 723 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 PLA2G15Q8NCC3 412 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 CDKL2Q92772 493 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 SCAMP4Q969E2 229 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 TRIM56Q9BRZ2 755 aaKnown RBP19.21■□□□□ 0.67
CCM2-216ENST00000488727 C12orf65Q9H3J6 166 aaKnown RBP19.21■□□□□ 0.67
CCM2-216ENST00000488727 UGT1A7Q9HAW7 530 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 UGT1A10Q9HAW8 530 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 UGT1A8Q9HAW9 530 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 TM9SF3Q9HD45 589 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 IL17CQ9P0M4 197 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 LAMA1P25391 3075 aa19.21■□□□□ 0.67
CCM2-216ENST00000488727 TP53BP1Q12888 1972 aaPredicted RBP19.21■□□□□ 0.67
CCM2-216ENST00000488727 HMX2A2RU54 273 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 POM121BA6NF01 834 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 K7ESM1 405 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 MGRN1O60291 552 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 ATP5HO75947 161 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 BPIP17213 487 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 AKT2P31751 481 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 ELF3P78545 371 aaPredicted RBP19.2■□□□□ 0.66
CCM2-216ENST00000488727 CRADDP78560 199 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 CRYMQ14894 314 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 LAYNQ6UX15 382 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 ASRGL1Q7L266 308 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 GPR26Q8NDV2 337 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 DENND6BQ8NEG7 585 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 ACMSDQ8TDX5 336 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 BMFQ96LC9 184 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 C1QTNF7Q9BXJ2 289 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 MYLK2Q9H1R3 596 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 ABCG8Q9H221 673 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 TXLNGQ9NUQ3 528 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 PKD2L2Q9NZM6 624 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 RALGAPA1Q6GYQ0 2036 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 WDR91A4D1P6 747 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 BCAT2O15382 392 aaPredicted RBP19.2■□□□□ 0.66
CCM2-216ENST00000488727 CRTAMO95727 393 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 NQO1P15559 274 aaKnown RBP19.2■□□□□ 0.66
CCM2-216ENST00000488727 LPOP22079 712 aaPredicted RBP19.2■□□□□ 0.66
CCM2-216ENST00000488727 CRHR1P34998 444 aa19.2■□□□□ 0.66
CCM2-216ENST00000488727 ZNF140P52738 457 aaPredicted RBP19.2■□□□□ 0.66
CCM2-216ENST00000488727 RACK1P63244 317 aaKnown RBP19.2■□□□□ 0.66
CCM2-216ENST00000488727 SEPT6Q14141 434 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms