RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 hCG_1818297A0A087WSY0 165 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 SOWAHDA6NJG2 315 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 EFCAB7A8K855 629 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 H7C0C1 242 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 HGSO14964 777 aaPredicted RBP11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 DUX1O43812 170 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 ZRANB2O95218 330 aaKnown RBP eCLIP11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 ZIC2O95409 532 aaPredicted RBP11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 THRAP10827 490 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 F3P13726 295 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 ATP5OP48047 213 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 NR2C2P49116 596 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 ARSDP51689 593 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 NAP1L1P55209 391 aaKnown RBP11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 CYP4F2P78329 520 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 GPLD1P80108 840 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 TAZQ16635 292 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 INSCQ1MX18 579 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 KHDC1Q4VXA5 237 aaKnown RBP11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 SIRPB2Q5JXA9 342 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 TMEM71Q6P5X7 295 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 SARM1Q6SZW1 724 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 KDELC1Q6UW63 502 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 DAAM2Q86T65 1068 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC9B2Q86UD5 537 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 PHYKPLQ8IUZ5 450 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 KATNAL2Q8IYT4 538 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 RCOR2Q8IZ40 523 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 ZNF567Q8N184 647 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 IPMKQ8NFU5 416 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 OR4D9Q8NGE8 314 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 GDAP1Q8TB36 358 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 BLOC1S5Q8TDH9 187 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 FAM118BQ9BPY3 351 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 STN1Q9H668 368 aaKnown RBP11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC39A1Q9NY26 324 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 SCHIP1Q9P0W5 487 aaPredicted RBP11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 CPNE7Q9UBL6 633 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 TMPRSS11EQ9UL52 423 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 PCDHB11Q9Y5F2 797 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 B3GALT1Q9Y5Z6 326 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 KALRNO60229 2985 aa11.16□□□□□ -0.62
NIPAL3-207ENST00000488155 HELZ2Q9BYK8 2649 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 MACROD2A1Z1Q3 448 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 RCCD1A6NED2 376 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 PDZK1P1A8MUH7 402 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 GPR39O43194 453 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 CDK14O94921 469 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 LCA5LO95447 670 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 TYRP1P17643 537 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 WT1P19544 449 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 RPL10P27635 214 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 CYLC1P35663 651 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 TNNT3P45378 269 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 HADHBP55084 474 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 DCDC1P59894 354 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 TRA2AQ13595 282 aaKnown RBP eCLIP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 PTPRCAPQ14761 206 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 CLPPQ16740 277 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 ATP13A5Q4VNC0 1218 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 CCDC181Q5TID7 509 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 ANKS6Q68DC2 871 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 LRRTM4Q86VH4 590 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 LSM14AQ8ND56 463 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 AGBL5Q8NDL9 886 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 SNRNP27Q8WVK2 155 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 HTR3CQ8WXA8 447 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 OXNAD1Q96HP4 312 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 MRGPRX2Q96LB1 330 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 PLEKHG4BQ96PX9 1271 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 TAAR9Q96RI9 348 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 CTRCQ99895 268 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 HERPUD2Q9BSE4 406 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 RBSNQ9H1K0 784 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 SARS2Q9NP81 518 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 RSPH14Q9UHP6 348 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 ACSL6Q9UKU0 697 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 EPN1Q9Y6I3 576 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 DUSP10Q9Y6W6 482 aa11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 GCN1Q92616 2671 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-207ENST00000488155 SPTA1P02549 2419 aa11.15□□□□□ -0.63
NIPAL3-207ENST00000488155 ZNF462Q96JM2 2506 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 MED13Q9UHV7 2174 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 LOC285095A0A1B0GVY8 99 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 A6NCN8 305 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 KMOO15229 486 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 UGT1A9O60656 530 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 VIPP01282 170 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 SLC2A4P14672 509 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 ZNF7P17097 686 aaPredicted RBP11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 UGT1A6P19224 532 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 UGT1A1P22309 533 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 UGT1A4P22310 534 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 RBL1P28749 1068 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 CA5AP35218 305 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 UGT1A3P35503 534 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 SLC19A1P41440 591 aa11.14□□□□□ -0.63
NIPAL3-207ENST00000488155 ZNF75DP51815 510 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms