RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 CNGA3Q16281 694 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 PTCHD3Q3KNS1 767 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 AGAP7PQ5VUJ5 663 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 OLFML1Q6UWY5 402 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 Q6ZVL8 140 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 NLRP14Q86W24 1093 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 WDTC1Q8N5D0 677 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 WFDC11Q8NEX6 87 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 ZNF606Q8WXB4 792 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 CPT1BQ92523 772 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 DTD2Q96FN9 168 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 AGAP4Q96P64 663 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 ATP13A3Q9H7F0 1226 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 UCK1Q9HA47 277 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 GPAMQ9HCL2 828 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 ACP6Q9NPH0 428 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 SCHIP1Q9P0W5 487 aaPredicted RBP11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 ST6GALNAC2Q9UJ37 374 aa11.94□□□□□ -0.5
ATPAF1-205ENST00000487193 ALOX12BO75342 701 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 JCHAINP01591 159 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 EPB41P11171 864 aaKnown RBP11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 RHOQP17081 205 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 MST1P26927 711 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 SOX8P57073 446 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 TUBB4BP68371 445 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 BCL2L1Q07817 233 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 TUBB2AQ13885 445 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 NCF4Q15080 339 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 STK38Q15208 465 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 RPUSD3Q6P087 351 aaKnown RBP11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 SHC4Q6S5L8 630 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 IGFL2Q6UWQ7 119 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 SRLQ86TD4 932 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 FAM131BQ86XD5 332 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 PHC2Q8IXK0 858 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 SYTL1Q8IYJ3 562 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 AVL9Q8NBF6 648 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 UBXN4Q92575 508 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 LRFN5Q96NI6 719 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 TUBGCP5Q96RT8 1024 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 NDC1Q9BTX1 674 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 TUBB2BQ9BVA1 445 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 MAGEB5Q9BZ81 275 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 METTL14Q9HCE5 456 aaKnown RBP11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 TMEM248Q9NWD8 314 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 KCTD5Q9NXV2 234 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 OR12D3Q9UGF7 316 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 STAP1Q9ULZ2 295 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 PLEKHA6Q9Y2H5 1048 aa11.93□□□□□ -0.5
ATPAF1-205ENST00000487193 SLC19A2O60779 497 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 DNAJC6O75061 913 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 LCA5LO95447 670 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 ERBB2P04626 1255 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 XRCC1P18887 633 aaPredicted RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 DNASE1P24855 282 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 SLC19A1P41440 591 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 RGRP47804 291 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 YBX1P67809 324 aaKnown RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 CYP2A13Q16696 494 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 MLIPQ5VWP3 458 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 CES4AQ5XG92 561 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 LINC00696Q6ZRV3 163 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 RFLNAQ6ZTI6 216 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 PASD1Q8IV76 773 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 DNAAF3Q8N9W5 541 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 CA5BP1Q8WTZ4 195 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 ZNF501Q96CX3 271 aaPredicted RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 PGAP3Q96FM1 320 aaPredicted RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 PCMTD1Q96MG8 357 aaPredicted RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 MAP3K3Q99759 626 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 OSGEPL1Q9H4B0 414 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 EPS8L2Q9H6S3 715 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 DNAJB12Q9NXW2 375 aaKnown RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 ZNF624Q9P2J8 865 aaPredicted RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 PADI2Q9Y2J8 665 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 SIK3Q9Y2K2 1263 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 PTRH2Q9Y3E5 179 aaKnown RBP11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 DOCK10Q96BY6 2186 aa11.92□□□□□ -0.5
ATPAF1-205ENST00000487193 C9J4A7 227 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 FAM72CH0Y354 149 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 KLF7O75840 302 aaPredicted RBP11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 HEXIM1O94992 359 aaKnown RBP11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 ZWINTO95229 277 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 SOD1P00441 154 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 TEAD1P28347 426 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 VIPR1P32241 457 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 RORAP35398 523 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 DGKQP52824 942 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 HSD11B2P80365 405 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 AIMP2Q13155 320 aaKnown RBP11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 PTPRRQ15256 657 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 FAM72AQ5TYM5 149 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 FAM72DQ6L9T8 149 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 ADAMTSL4Q6UY14 1074 aa11.91□□□□□ -0.5
ATPAF1-205ENST00000487193 SLC26A9Q7LBE3 791 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms