RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 PRAMEF1O95521 474 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 CRTAMO95727 393 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 GPR89BP0CG08 455 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 STIP1P31948 543 aaKnown RBP22.11■■□□□ 1.13
CDHR3-212ENST00000487084 ACTN2P35609 894 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 PDX1P52945 283 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 OR1D5P58170 312 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 ITGA9Q13797 1035 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 OASLQ15646 514 aaKnown RBP22.11■■□□□ 1.13
CDHR3-212ENST00000487084 DENND5AQ6IQ26 1287 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 B3GNT8Q7Z7M8 397 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 LRRTM4Q86VH4 590 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 TRAPPC5Q8IUR0 188 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 BRSK1Q8TDC3 778 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 RTP4Q96DX8 246 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 EPB41L5Q9HCM4 733 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 PIH1D1Q9NWS0 290 aaKnown RBP22.11■■□□□ 1.13
CDHR3-212ENST00000487084 TBC1D29Q9UFV1 150 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 FKBPLQ9UIM3 349 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 SATB2Q9UPW6 733 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 DNAJC16Q9Y2G8 782 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 ACACAQ13085 2346 aa22.11■■□□□ 1.13
CDHR3-212ENST00000487084 GAPDHSO14556 408 aaPredicted RBP22.1■■□□□ 1.13
CDHR3-212ENST00000487084 CHUKO15111 745 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 KMOO15229 486 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 PSMD3O43242 534 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 CEP104O60308 925 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 EML2O95834 649 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 FGGP02679 453 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 CXCR5P32302 372 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 PPM1FP49593 454 aaPredicted RBP22.1■■□□□ 1.13
CDHR3-212ENST00000487084 TMPRSS15P98073 1019 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 SEPT6Q14141 434 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 MAP9Q49MG5 647 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 KCTD11Q693B1 232 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 KLHDC8BQ8IXV7 354 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 OR13C4Q8NGS5 318 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 SLC37A2Q8TED4 501 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 ANP32BQ92688 251 aaKnown RBP22.1■■□□□ 1.13
CDHR3-212ENST00000487084 GRAMD1AQ96CP6 724 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 ZCCHC2Q9C0B9 1178 aaKnown RBP22.1■■□□□ 1.13
CDHR3-212ENST00000487084 POLR1BQ9H9Y6 1135 aa22.1■■□□□ 1.13
CDHR3-212ENST00000487084 FEZ2Q9UHY8 353 aaPredicted RBP22.1■■□□□ 1.13
CDHR3-212ENST00000487084 AGRPO00253 132 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 PPM1DO15297 605 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 ZW10O43264 779 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 AP2A1O95782 977 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 ZNF7P17097 686 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-212ENST00000487084 TPH1P17752 444 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 AKT1P31749 480 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 LMAN1P49257 510 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 INHBCP55103 352 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 B4GALNT1Q00973 533 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 PDE1BQ01064 536 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 TMEM115Q12893 351 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-212ENST00000487084 LDLRAP1Q5SW96 308 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 PRUNE1Q86TP1 453 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 ZNF761Q86XN6 746 aaPredicted RBP22.09■■□□□ 1.13
CDHR3-212ENST00000487084 SFRP1Q8N474 314 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 CCDC89Q8N998 374 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 ZNF398Q8TD17 642 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 DTX3LQ8TDB6 740 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 DCBLD2Q96PD2 775 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 ZMYND15Q9H091 742 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 ARNT2Q9HBZ2 717 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 PRDM8Q9NQV8 689 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 SLC23A2Q9UGH3 650 aa22.09■■□□□ 1.13
CDHR3-212ENST00000487084 E7EVH7 732 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 B4GAT1O43505 415 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 SLC2A4P14672 509 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 ETS1P14921 441 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 CA5AP35218 305 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 LSSP48449 732 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 ZNF140P52738 457 aaPredicted RBP22.08■■□□□ 1.13
CDHR3-212ENST00000487084 MSLNQ13421 630 aaPredicted RBP22.08■■□□□ 1.13
CDHR3-212ENST00000487084 SEPT7Q16181 437 aaKnown RBP22.08■■□□□ 1.13
CDHR3-212ENST00000487084 LONRF2Q1L5Z9 754 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 GPRC6AQ5T6X5 926 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 ZNF438Q7Z4V0 828 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 DDHD1Q8NEL9 900 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 MAIP1Q8WWC4 291 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 TMEM74Q96NL1 305 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 STRADBQ9C0K7 418 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 STN1Q9H668 368 aaKnown RBP22.08■■□□□ 1.13
CDHR3-212ENST00000487084 ASB8Q9H765 288 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 RDH14Q9HBH5 336 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 KCNK4Q9NYG8 393 aa22.08■■□□□ 1.13
CDHR3-212ENST00000487084 KMT2BQ9UMN6 2715 aaPredicted RBP22.08■■□□□ 1.13
CDHR3-212ENST00000487084 COL27A1Q8IZC6 1860 aaPredicted RBP22.08■■□□□ 1.13
CDHR3-212ENST00000487084 CCDC187A0A096LP49 1063 aa22.07■■□□□ 1.12
CDHR3-212ENST00000487084 PDZK1P1A8MUH7 402 aa22.07■■□□□ 1.12
CDHR3-212ENST00000487084 CCL22O00626 93 aa22.07■■□□□ 1.12
CDHR3-212ENST00000487084 SRP72O76094 671 aaKnown RBP22.07■■□□□ 1.12
CDHR3-212ENST00000487084 F3P13726 295 aa22.07■■□□□ 1.12
CDHR3-212ENST00000487084 FDFT1P37268 417 aa22.07■■□□□ 1.12
CDHR3-212ENST00000487084 HHEXQ03014 270 aa22.07■■□□□ 1.12
CDHR3-212ENST00000487084 NFATC2Q13469 925 aa22.07■■□□□ 1.12
CDHR3-212ENST00000487084 POU6F1Q14863 301 aa22.07■■□□□ 1.12
CDHR3-212ENST00000487084 SIX1Q15475 284 aaPredicted RBP22.07■■□□□ 1.12
CDHR3-212ENST00000487084 TBC1D25Q3MII6 688 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms