RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 PRMT5O14744 637 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 SGTAO43765 313 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 MTX2O75431 263 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 FAM155BO75949 473 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 HAUS5O94927 633 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 SLC25A14O95258 325 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 RPS3P23396 243 aaKnown RBP eCLIP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 PMLP29590 882 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 NSG1P42857 185 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 RABIFP47224 123 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 CD151P48509 253 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 LIMK2P53671 638 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 EIF3BP55884 814 aaKnown RBP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 YPEL5P62699 121 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 RACK1P63244 317 aaKnown RBP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 ZNF844Q08AG5 666 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 NFATC4Q14934 902 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 WDR45BQ5MNZ6 344 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 CTSL3PQ5NE16 218 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 TPRG1LQ5T0D9 272 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 LYSMD4Q5XG99 296 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 ZNF549Q6P9A3 640 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 CNSTQ6PJW8 725 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 LRIG3Q6UXM1 1119 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 ARMCX6Q7L4S7 300 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 STRA8Q7Z7C7 330 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 ADGRG6Q86SQ4 1221 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 IQCHQ86VS3 1027 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 OR13H1Q8NG92 308 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 EPS8L3Q8TE67 593 aaKnown RBP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 HEXDCQ8WVB3 486 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 VPS39Q96JC1 886 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 ZIM3Q96PE6 472 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 TTC1Q99614 292 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 RBBP8Q99708 897 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 ZCCHC2Q9C0B9 1178 aaKnown RBP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 RHOJQ9H4E5 214 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 TM9SF3Q9HD45 589 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 PHPT1Q9NRX4 125 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 ZNF446Q9NWS9 450 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 SLC24A2Q9UI40 661 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 CORO1CQ9ULV4 474 aaPredicted RBP9.47□□□□□ -0.89
MCF2L-227ENST00000486806 SLC17A4Q9Y2C5 497 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 MED16Q9Y2X0 877 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 PRSS21Q9Y6M0 314 aa9.47□□□□□ -0.89
MCF2L-227ENST00000486806 ZNF318Q5VUA4 2279 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 HMX2A2RU54 273 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 TMEM202A6NGA9 273 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 GPR89AB7ZAQ6 455 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 CFAP99D6REC4 459 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 CACNB4O00305 520 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 MAP2K7O14733 419 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 CHUKO15111 745 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PFDN6O15212 129 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 VEGFDO43915 354 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 NDUFS3O75489 264 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 SASH3O75995 380 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 AP2A2O94973 939 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ESR1P03372 595 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 WNT1P04628 370 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 IVLP07476 585 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 INHBAP08476 426 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ITGA2BP08514 1039 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 GPR89BP0CG08 455 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ATP1B2P14415 290 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ZNF7P17097 686 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ITPKAP23677 461 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 MAOBP27338 520 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 AKT1P31749 480 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PPARGP37231 505 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ABCG1P45844 678 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PRLHRP49683 370 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 CTSCP53634 463 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 TCF15Q12870 199 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 OVGP1Q12889 678 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 TMEM115Q12893 351 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ILF2Q12905 390 aaKnown RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PDE1CQ14123 709 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 BCL7AQ4VC05 210 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ZNF648Q5T619 568 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 GRTP1Q5TC63 336 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 KCTD16Q68DU8 428 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ADGRD1Q6QNK2 874 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 MACC1Q6ZN28 852 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 Q6ZSR6 202 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 HDXQ7Z353 690 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 RASGEF1AQ8N9B8 481 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 MFSD2AQ8NA29 543 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 PRSS33Q8NF86 280 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 GDAP1Q8TB36 358 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 MZB1Q8WU39 189 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 KCNJ9Q92806 393 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ISL2Q96A47 359 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 SCARF2Q96GP6 870 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 GPR22Q99680 433 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 CCDC77Q9BR77 488 aa9.46□□□□□ -0.9
MCF2L-227ENST00000486806 AARSD1Q9BTE6 412 aaKnown RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 ROPN1BQ9BZX4 212 aaPredicted RBP9.46□□□□□ -0.9
MCF2L-227ENST00000486806 VIPAS39Q9H9C1 493 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms