RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 ZMYND15Q9H091 742 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 ISCUQ9H1K1 167 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 FAM83DQ9H4H8 585 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 KLC4Q9NSK0 619 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 SEMA5BQ9P283 1151 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 TMPRSS11EQ9UL52 423 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 CDC14CA4D256 554 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 LRRC53A6NM62 1247 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 MATN3O15232 486 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 TOX3O15405 576 aaPredicted RBP14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 MFSD11O43934 449 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 RFPL1O75677 317 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 UBXN7O94888 489 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 NDUFA10O95299 355 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 TPM2P07951 284 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 GARSP41250 739 aaKnown RBP14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 PRKCIP41743 596 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 PPM1FP49593 454 aaPredicted RBP14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 IL11RAQ14626 422 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 ATP13A4Q4VNC1 1196 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 KHDC1Q4VXA5 237 aaKnown RBP14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 PRSS42Q7Z5A4 293 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 ADGRG6Q86SQ4 1221 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 CPNE8Q86YQ8 564 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 LRRC49Q8IUZ0 686 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 ZNF547Q8IVP9 402 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 GALNT11Q8NCW6 608 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 CT55Q8WUE5 264 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 TEKT4Q8WW24 435 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 FATE1Q969F0 183 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 ZNF653Q96CK0 615 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 BTBD6Q96KE9 485 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 TGM7Q96PF1 710 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 TSGA13Q96PP4 275 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 OR2AG1Q9H205 316 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 LMBRD1Q9NUN5 540 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 RBM22Q9NW64 420 aaKnown RBP eCLIP14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 MAP4K5Q9Y4K4 846 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 POLQO75417 2590 aa14.05□□□□□ -0.16
SDCCAG3-211ENST00000486441 ZNF106Q9H2Y7 1883 aaKnown RBP14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 RGSL1A5PLK6 1076 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 ANKRD66B4E2M5 251 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 KATNA1O75449 491 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 SORBS2O94875 1100 aaKnown RBP14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 HLA-DQB2P05538 268 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 CCDC172P0C7W6 258 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 CES1P23141 567 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 RPL26P61254 145 aaKnown RBP14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 PPP1CAP62136 330 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 ITKQ08881 620 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 SLC10A2Q12908 348 aaPredicted RBP14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 DNASE1L3Q13609 305 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 PAFAH1B3Q15102 231 aaKnown RBP14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 NADK2Q4G0N4 442 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 NCBP2-AS2Q69YL0 99 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 ABRAXAS1Q6UWZ7 409 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 C11orf96Q7Z7L8 435 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 NDUFAF2Q8N183 169 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 GPR26Q8NDV2 337 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 LPCAT1Q8NF37 534 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 NSMCE1Q8WV22 266 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 ELMO2Q96JJ3 720 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 PCDH9Q9HC56 1237 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 SLC40A1Q9NP59 571 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 LHX9Q9NQ69 397 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 MYO1AQ9UBC5 1043 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 EPHA6Q9UF33 1036 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 PADI1Q9ULC6 663 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 RPL26L1Q9UNX3 145 aaKnown RBP14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 PCDHB3Q9Y5E6 796 aa14.04□□□□□ -0.16
SDCCAG3-211ENST00000486441 C1orf232A0A0U1RR37 186 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 PIPSLA2A3N6 862 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 SKILP12757 684 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 SLC2A4P14672 509 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 NELFEP18615 380 aaKnown RBP14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 EPHB1P54762 984 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 MYL5Q02045 173 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 PAPD7Q5XG87 772 aaKnown RBP14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 CPZQ66K79 652 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 PWWP2BQ6NUJ5 590 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 FAM199XQ6PEV8 388 aaPredicted RBP14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 CERS6Q6ZMG9 384 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 CNTD1Q8N815 330 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 NIPA2Q8N8Q9 360 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 TRIB3Q96RU7 358 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 TWSG1Q9GZX9 223 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 BRD8Q9H0E9 1235 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 STN1Q9H668 368 aaKnown RBP14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 TRIM39Q9HCM9 518 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 RTN4Q9NQC3 1192 aaKnown RBP14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 AMACRQ9UHK6 382 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 KCND3Q9UK17 655 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 DNPEPQ9ULA0 475 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 SCINQ9Y6U3 715 aa14.03□□□□□ -0.16
SDCCAG3-211ENST00000486441 IGHV5-51A0A0C4DH38 117 aa14.02□□□□□ -0.17
SDCCAG3-211ENST00000486441 OR52A4PA6NMU1 304 aa14.02□□□□□ -0.17
SDCCAG3-211ENST00000486441 TTLL8A6PVC2 850 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms