RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 EBF2Q9HAK2 575 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 UGT1A7Q9HAW7 530 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 UGT1A10Q9HAW8 530 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 UGT1A8Q9HAW9 530 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 ARNT2Q9HBZ2 717 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 ARFGAP3Q9NP61 516 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 PARD6AQ9NPB6 346 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 FSCN3Q9NQT6 498 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 IL17CQ9P0M4 197 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 MTRF1LQ9UGC7 380 aaKnown RBP5.6□□□□□ -1.51
COPS3-208ENST00000486032 NFU1Q9UMS0 254 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.6□□□□□ -1.51
COPS3-208ENST00000486032 TCAF1Q9Y4C2 921 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 PCDHGA2Q9Y5H1 932 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.6□□□□□ -1.51
COPS3-208ENST00000486032 SLCO1B1Q9Y6L6 691 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 SLC30A1Q9Y6M5 507 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 LRRK1Q38SD2 2015 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 CEP192Q8TEP8 1941 aa5.6□□□□□ -1.51
COPS3-208ENST00000486032 TNRC6BQ9UPQ9 1833 aaKnown RBP5.6□□□□□ -1.51
COPS3-208ENST00000486032 SDK1Q7Z5N4 2213 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ZFHX2Q9C0A1 2572 aaPredicted RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 GLYATL1P3A0A0U1RQE8 302 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 A0A1W2PPC4 97 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 CCDC162PA2VCL2 907 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 POM121BA6NF01 834 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 PRAMEF26H0Y7S4 382 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 K7ESM1 405 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 PSMD11O00231 422 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 LDB2O43679 373 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 MTX2O75431 263 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 VAPBO95292 243 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 PRAMEF1O95521 474 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 WNT11O96014 354 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 GOT2P00505 430 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 TGFB1P01137 390 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 MLNP12872 115 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 CD27P26842 260 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 IGFALSP35858 605 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 NBL1P41271 181 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 CSNK1EP49674 416 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 CDKN1CP49918 316 aaPredicted RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 CCR5P51681 352 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ARSDP51689 593 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ZNF140P52738 457 aaPredicted RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 DRG2P55039 364 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 PDE1BQ01064 536 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 MSLNQ13421 630 aaPredicted RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 LAMB3Q13751 1172 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 THOC5Q13769 683 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 INPP5AQ14642 412 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 CHRNA6Q15825 494 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 SKIDA1Q1XH10 827 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 TMEM259Q4ZIN3 620 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ZNF542PQ5EBM4 170 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 PRAMEF14Q5SWL7 426 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 GCNT7Q6ZNI0 430 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 MARK2Q7KZI7 788 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 RD3Q7Z3Z2 195 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 TECPR1Q7Z6L1 1165 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 LDB1Q86U70 411 aaPredicted RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 IGDCC3Q8IVU1 814 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ZBTB44Q8NCP5 570 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 CADM4Q8NFZ8 388 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ZNF398Q8TD17 642 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 PYROXD1Q8WU10 500 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 NAT14Q8WUY8 206 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 HDAC10Q969S8 669 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 KLHDC7BQ96G42 594 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 CDKN2AIPNLQ96HQ2 116 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 SIGLEC10Q96LC7 697 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 LENG8Q96PV6 779 aaPredicted RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 RANBP9Q96S59 729 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 LYSMD1Q96S90 227 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 FMO2Q99518 471 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 PRRX2Q99811 253 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 EBNA1BP2Q99848 306 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 ARRDC1-AS1Q9H2J1 176 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ASB8Q9H765 288 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ANKZF1Q9H8Y5 726 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 VPS37BQ9H9H4 285 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 TM9SF3Q9HD45 589 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 PPANQ9NQ55 473 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 GDF3Q9NR23 364 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 IARS2Q9NSE4 1012 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 C20orf96Q9NUD7 363 aaPredicted RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 TMEM74BQ9NUR3 256 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 ZC3H7BQ9UGR2 993 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 CRLS1Q9UJA2 301 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 SOX13Q9UN79 622 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 SMG5Q9UPR3 1016 aaKnown RBP5.59□□□□□ -1.51
COPS3-208ENST00000486032 OR1A2Q9Y585 309 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 RPS6KL1Q9Y6S9 549 aa5.59□□□□□ -1.51
COPS3-208ENST00000486032 PLXNA2O75051 1894 aa5.58□□□□□ -1.52
COPS3-208ENST00000486032 A0A1B0GVT2 93 aa5.58□□□□□ -1.52
COPS3-208ENST00000486032 MROH6A6NGR9 719 aa5.58□□□□□ -1.52
COPS3-208ENST00000486032 A6NNZ2 444 aa5.58□□□□□ -1.52
COPS3-208ENST00000486032 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
COPS3-208ENST00000486032 FADS2P1A8MWK0 482 aa5.58□□□□□ -1.52
COPS3-208ENST00000486032 PATE3B3GLJ2 98 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms