RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TRAM1L1Q8N609 369 aa16.94■□□□□ 0.3
SMC4-216ENST00000485645 TEFMQ96QE5 360 aaKnown RBP16.94■□□□□ 0.3
SMC4-216ENST00000485645 FAM117AQ9C073 453 aa16.94■□□□□ 0.3
SMC4-216ENST00000485645 PRDM8Q9NQV8 689 aa16.94■□□□□ 0.3
SMC4-216ENST00000485645 KLC4Q9NSK0 619 aa16.94■□□□□ 0.3
SMC4-216ENST00000485645 CPNE7Q9UBL6 633 aa16.94■□□□□ 0.3
SMC4-216ENST00000485645 ZNF711Q9Y462 761 aa16.94■□□□□ 0.3
SMC4-216ENST00000485645 HEMK1Q9Y5R4 338 aaPredicted RBP16.94■□□□□ 0.3
SMC4-216ENST00000485645 FLNBO75369 2602 aaKnown RBP16.94■□□□□ 0.3
SMC4-216ENST00000485645 MFAP3LO75121 409 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 FAM87AP0C7U9 286 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 MAPK9P45984 424 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 B4GALNT4Q76KP1 1039 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 BZW1Q7L1Q6 419 aaKnown RBP16.93■□□□□ 0.3
SMC4-216ENST00000485645 ADGRG6Q86SQ4 1221 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 VSTM4Q8IW00 320 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 BMPERQ8N8U9 685 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 SPATA22Q8NHS9 363 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 HTR3CQ8WXA8 447 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 GLYATL1Q969I3 302 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 TADA1Q96BN2 335 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 SRPK1Q96SB4 655 aaKnown RBP16.93■□□□□ 0.3
SMC4-216ENST00000485645 SLC12A9Q9BXP2 914 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 TSPY26PQ9H489 355 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 OSGEPL1Q9H4B0 414 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 EPB41L1Q9H4G0 881 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 GLOD4Q9HC38 313 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 NFKBIL1Q9UBC1 381 aaPredicted RBP16.93■□□□□ 0.3
SMC4-216ENST00000485645 ADGRG1Q9Y653 693 aa16.93■□□□□ 0.3
SMC4-216ENST00000485645 A0A0A6YYK5 440 aaPredicted RBP16.92■□□□□ 0.3
SMC4-216ENST00000485645 RAD1O60671 282 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 NDST3O95803 873 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 MT-CYBP00156 380 aaPredicted RBP16.92■□□□□ 0.3
SMC4-216ENST00000485645 NR2C2P49116 596 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 MC2RQ01718 297 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 INSCQ1MX18 579 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 CRTC3Q6UUV7 619 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 MFSD7Q6UXD7 560 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 CEACAM20Q6UY09 585 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 PRICKLE2Q7Z3G6 844 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 RTP4Q96DX8 246 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 PLEKHG4BQ96PX9 1271 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 ZPBPQ9BS86 351 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 TBC1D10AQ9BXI6 508 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 STARD5Q9NSY2 213 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 KLHL3Q9UH77 587 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 INTUQ9ULD6 942 aa16.92■□□□□ 0.3
SMC4-216ENST00000485645 LILRA5A6NI73 299 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 CHUKO15111 745 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 KMOO15229 486 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 SPOPO43791 374 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 VEGFDO43915 354 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 PMPCBO75439 489 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 LIFP15018 202 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 BPIP17213 487 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 XRCC1P18887 633 aaPredicted RBP16.91■□□□□ 0.3
SMC4-216ENST00000485645 PTPN3P26045 913 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 UBE2IP63279 158 aaKnown RBP16.91■□□□□ 0.3
SMC4-216ENST00000485645 PLA2G4EQ3MJ16 856 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 LRRTM4Q86VH4 590 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 PLXDC1Q8IUK5 500 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 TRIM48Q8IWZ4 208 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 TEKT5Q96M29 485 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 CTRCQ99895 268 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 UCK1Q9HA47 277 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 FBXO8Q9NRD0 319 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 UBP1Q9NZI7 540 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 SLC23A2Q9UGH3 650 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 PILRAQ9UKJ1 303 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 HYOU1Q9Y4L1 999 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 SPTA1P02549 2419 aa16.91■□□□□ 0.3
SMC4-216ENST00000485645 TENM4Q6N022 2769 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 SETXQ7Z333 2677 aaKnown RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 BSNQ9UPA5 3926 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 MTX2O75431 263 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 CDK14O94921 469 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 VIPP01282 170 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 ZNF7P17097 686 aaPredicted RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 ITGB6P18564 788 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 COMTP21964 271 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 MAP4P27816 1152 aaKnown RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 NOP2P46087 812 aaKnown RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 TFDP2Q14188 446 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 PRKD1Q15139 912 aaPredicted RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 TCEAL1Q15170 157 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 NLGN4XQ8N0W4 816 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 NLGN4YQ8NFZ3 816 aaPredicted RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 TFB1MQ8WVM0 346 aaKnown RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 TIMM29Q9BSF4 260 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 SPRY4Q9C004 299 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 SCHIP1Q9P0W5 487 aaPredicted RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 SAE1Q9UBE0 346 aaPredicted RBP16.9■□□□□ 0.3
SMC4-216ENST00000485645 FAM153AQ9UHL3 310 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 DNAJC16Q9Y2G8 782 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 BOD1L1Q8NFC6 3051 aa16.9■□□□□ 0.3
SMC4-216ENST00000485645 PDZK1P1A8MUH7 402 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 PYCARD-AS1I3L0S3 204 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 AURKAO14965 403 aa16.89■□□□□ 0.29
SMC4-216ENST00000485645 POLR1CO15160 346 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms