RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 IMP4Q96G21 291 aaKnown RBP18.99■□□□□ 0.63
COL27A1-205ENST00000485397 SLC45A3Q96JT2 553 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 AGAP3Q96P47 875 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 ADNPQ9H2P0 1102 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 OSGEPL1Q9H4B0 414 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 GPN2Q9H9Y4 310 aaPredicted RBP18.99■□□□□ 0.63
COL27A1-205ENST00000485397 TRIM39Q9HCM9 518 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 SLC23A2Q9UGH3 650 aa18.99■□□□□ 0.63
COL27A1-205ENST00000485397 C3orf70A6NLC5 250 aaPredicted RBP18.98■□□□□ 0.63
COL27A1-205ENST00000485397 ARHGAP6O43182 974 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 TMEM253P0C7T8 217 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 MAP4P27816 1152 aaKnown RBP18.98■□□□□ 0.63
COL27A1-205ENST00000485397 GFERP55789 205 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 PCSK7Q16549 785 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 SLC9A4Q6AI14 798 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 NT5DC3Q86UY8 548 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 TRAM1L1Q8N609 369 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.98■□□□□ 0.63
COL27A1-205ENST00000485397 COL26A1Q96A83 441 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 RNF31Q96EP0 1072 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 XPO4Q9C0E2 1151 aaKnown RBP18.98■□□□□ 0.63
COL27A1-205ENST00000485397 OGFRQ9NZT2 677 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 LCMT1Q9UIC8 334 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 ZNF711Q9Y462 761 aa18.98■□□□□ 0.63
COL27A1-205ENST00000485397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.98■□□□□ 0.631e-6■■□□□ 13.2
COL27A1-205ENST00000485397 BSNQ9UPA5 3926 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 LILRA5A6NI73 299 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 APOL1O14791 398 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 CAPN5O15484 640 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-205ENST00000485397 MTX2O75431 263 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 STK17BO94768 372 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 PRKAR1AP10644 381 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 TYRP1P17643 537 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 SLC19A1P41440 591 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 CCR10P46092 362 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 CDK18Q07002 472 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 KCNAB2Q13303 367 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 SPATA22Q8NHS9 363 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 SLC35G2Q8TBE7 412 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 GLYATL1Q969I3 302 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 OLFM3Q96PB7 478 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 ZPBPQ9BS86 351 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 ZSCAN5AQ9BUG6 496 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 MAK16Q9BXY0 300 aaKnown RBP18.97■□□□□ 0.63
COL27A1-205ENST00000485397 GPR63Q9BZJ6 419 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 SLC25A51Q9H1U9 297 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 EPB41L1Q9H4G0 881 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 MAGEE1Q9HCI5 957 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 ZNF624Q9P2J8 865 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-205ENST00000485397 DNAJC16Q9Y2G8 782 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 TMEM184BQ9Y519 407 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-205ENST00000485397 SLC30A1Q9Y6M5 507 aa18.97■□□□□ 0.63
COL27A1-205ENST00000485397 MN1Q10571 1320 aaPredicted RBP18.97■□□□□ 0.63
COL27A1-205ENST00000485397 CHUKO15111 745 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 POLR1CO15160 346 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-205ENST00000485397 MT-CYBP00156 380 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-205ENST00000485397 BPIP17213 487 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 XRCC1P18887 633 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-205ENST00000485397 DCDC1P59894 354 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 PDK1Q15118 436 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 SEPT7Q16181 437 aaKnown RBP18.96■□□□□ 0.63
COL27A1-205ENST00000485397 INSCQ1MX18 579 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 TMEM26Q6ZUK4 368 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 PLXDC1Q8IUK5 500 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 AVL9Q8NBF6 648 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 KIAA1143Q96AT1 154 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-205ENST00000485397 RNF25Q96BH1 459 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-205ENST00000485397 TADA1Q96BN2 335 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 CATSPER2Q96P56 530 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 DEF6Q9H4E7 631 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 SIDT1Q9NXL6 827 aaKnown RBP18.96■□□□□ 0.63
COL27A1-205ENST00000485397 NFKBIL1Q9UBC1 381 aaPredicted RBP18.96■□□□□ 0.63
COL27A1-205ENST00000485397 SPO11Q9Y5K1 396 aa18.96■□□□□ 0.63
COL27A1-205ENST00000485397 PDZK1P1A8MUH7 402 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 ZNF487B1APH4 448 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 AURKAO14965 403 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 MTA2O94776 668 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 DLGAP3O95886 979 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 VIPP01282 170 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 C9P02748 559 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 KRT1P04264 644 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 ZNF7P17097 686 aaPredicted RBP18.95■□□□□ 0.62
COL27A1-205ENST00000485397 OAS2P29728 719 aaKnown RBP18.95■□□□□ 0.62
COL27A1-205ENST00000485397 DYNLT1P63172 113 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 TLE1Q04724 770 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 ABHD18Q0P651 414 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 CDC20Q12834 499 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 KHDC1Q4VXA5 237 aaKnown RBP18.95■□□□□ 0.62
COL27A1-205ENST00000485397 PDPK2PQ6A1A2 396 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 LRRTM4Q86VH4 590 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 RFX6Q8HWS3 928 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 TRIM48Q8IWZ4 208 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 OR8K1Q8NGG5 319 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 C9orf72Q96LT7 481 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 UCK1Q9HA47 277 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 GLOD4Q9HC38 313 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 BPIFA1Q9NP55 256 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 RAD18Q9NS91 495 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 UBP1Q9NZI7 540 aa18.95■□□□□ 0.62
COL27A1-205ENST00000485397 TMPRSS11EQ9UL52 423 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms