RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 EIF4HQ15056 248 aaKnown RBP16.56■□□□□ 0.24
CTSA-207ENST00000484855 TSNQ15631 228 aaKnown RBP16.56■□□□□ 0.24
CTSA-207ENST00000484855 ZNF678Q5SXM1 525 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 RFLNAQ6ZTI6 216 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 FRMD7Q6ZUT3 714 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 RAB44Q7Z6P3 723 aaPredicted RBP16.56■□□□□ 0.24
CTSA-207ENST00000484855 CPA6Q8N4T0 437 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 PTGR2Q8N8N7 351 aaPredicted RBP16.56■□□□□ 0.24
CTSA-207ENST00000484855 MAPK15Q8TD08 544 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 EEF1AKMT1Q8WVE0 214 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 LRMDAQ9H2I8 198 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 EML4Q9HC35 981 aaKnown RBP16.56■□□□□ 0.24
CTSA-207ENST00000484855 PCDH12Q9NPG4 1184 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 VTI1BQ9UEU0 232 aa16.56■□□□□ 0.24
CTSA-207ENST00000484855 AGAP14A8MT82 685 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 SUPT3HB4E1H0 165 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 CDC7O00311 574 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 SUPT3HO75486 399 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 GFAPP14136 432 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 NQO1P15559 274 aaKnown RBP16.55■□□□□ 0.24
CTSA-207ENST00000484855 TIMP2P16035 220 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 HERVK_113P63132 956 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 KCNJ2P63252 427 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 FCHO2Q0JRZ9 810 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 GRM2Q14416 872 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 POM121L1PQ3SYA9 428 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 SLC9B1Q4ZJI4 515 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 SH2D4BQ5SQS7 431 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 RPS27LQ71UM5 84 aaKnown RBP16.55■□□□□ 0.24
CTSA-207ENST00000484855 YAF2Q8IY57 180 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 NAT14Q8WUY8 206 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 INPP5DQ92835 1189 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 NSL1Q96IY1 281 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 ERVK-6Q9BXR3 956 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 GSTO2Q9H4Y5 243 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 SLC40A1Q9NP59 571 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 ARHGEF3Q9NR81 526 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 DKK3Q9UBP4 350 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 DHRS7Q9Y394 339 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 PRSS21Q9Y6M0 314 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 DENND4AQ7Z401 1863 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 SYCE1LA8MT33 242 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 SUPT7LO94864 414 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 MTHFD2P13995 350 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 ATP13A5Q4VNC0 1218 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 TERB1Q8NA31 727 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 PTCD3Q96EY7 689 aaKnown RBP16.55■□□□□ 0.24
CTSA-207ENST00000484855 CCDC106Q9BWC9 280 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 LNPEPQ9UIQ6 1025 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 SORCS3Q9UPU3 1222 aa16.55■□□□□ 0.24
CTSA-207ENST00000484855 C16orf96A6NNT2 1141 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 CAPN14A8MX76 684 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 ECI2O75521 394 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 CALB2P22676 271 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 GALNT1Q10472 559 aaPredicted RBP16.54■□□□□ 0.24
CTSA-207ENST00000484855 RUNX3Q13761 415 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 UBAP2LQ14157 1087 aaKnown RBP16.54■□□□□ 0.24
CTSA-207ENST00000484855 TBCCQ15814 346 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 PFKFB4Q16877 469 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 ATAT1Q5SQI0 421 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 CUZD1Q86UP6 607 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 CLDN19Q8N6F1 224 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 KDM1BQ8NB78 822 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 LKAAEAR1Q8TD35 194 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 HCAR2Q8TDS4 363 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 ULK4Q96C45 1275 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 SLC7A6OSQ96CW6 309 aaPredicted RBP16.54■□□□□ 0.24
CTSA-207ENST00000484855 MYADMQ96S97 322 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 TRMOQ9BU70 441 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 ZDHHC3Q9NYG2 299 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 CD84Q9UIB8 345 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 EDDM13A0A1B0GTR0 161 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 GRID2O43424 1007 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 HLA-EP13747 358 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 ITGB6P18564 788 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 UNC50Q53HI1 259 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 CES5AQ6NT32 575 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 MACC1Q6ZN28 852 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 TREML1Q86YW5 311 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 PHTF2Q8N3S3 785 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 FBXO39Q8N4B4 442 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 AFAP1L2Q8N4X5 818 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 FUBP1Q96AE4 644 aaKnown RBP16.54■□□□□ 0.24
CTSA-207ENST00000484855 PPP1R36Q96LQ0 422 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 COPS8Q99627 209 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 KXD1Q9BQD3 176 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 NUF2Q9BZD4 464 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 PLA2G2FQ9BZM2 168 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 TCF7L2Q9NQB0 619 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 LRRK1Q38SD2 2015 aa16.54■□□□□ 0.24
CTSA-207ENST00000484855 CCDC189A1A4V9 331 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 TMEM233B4DJY2 109 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 KPNA3O00505 521 aaPredicted RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 NEMP1O14524 444 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 SLC25A14O95258 325 aaPredicted RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 TRIM16O95361 564 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 PRNPP04156 253 aa16.53■□□□□ 0.24
CTSA-207ENST00000484855 ENO1P06733 434 aaKnown RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 ESRRAP11474 423 aaPredicted RBP16.53■□□□□ 0.24
CTSA-207ENST00000484855 NSG1P42857 185 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms