RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZFP36L1Q07352 338 aaKnown RBP12.74□□□□□ -0.37
HDAC1-209ENST00000484305 MSLNQ13421 630 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-209ENST00000484305 BIRC2Q13490 618 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 PRPSAP1Q14558 356 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 CHRNA6Q15825 494 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 IGF2-ASQ6U949 168 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 CRTC3Q6UUV7 619 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 FAM151BQ6UXP7 276 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 USP53Q70EK8 1073 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 SFRP1Q8N474 314 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 CCDC112Q8NEF3 446 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 SLC35B2Q8TB61 432 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 SLC37A2Q8TED4 501 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 CRELD1Q96HD1 420 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 ZNF578Q96N58 590 aaPredicted RBP12.74□□□□□ -0.37
HDAC1-209ENST00000484305 TMEM74Q96NL1 305 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 TMEM121Q9BTD3 319 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 UGT1A7Q9HAW7 530 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 UGT1A10Q9HAW8 530 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 UGT1A8Q9HAW9 530 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 KLC4Q9NSK0 619 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 SLC23A2Q9UGH3 650 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 PKP3Q9Y446 797 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 KCTD3Q9Y597 815 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 PCDHGA8Q9Y5G5 932 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 ZFYVE26Q68DK2 2539 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 FAM208BQ5VWN6 2430 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 ITPR1Q14643 2758 aa12.74□□□□□ -0.37
HDAC1-209ENST00000484305 GLYATL1P3A0A0U1RQE8 302 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 A6NCN8 305 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 GPR89AB7ZAQ6 455 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 TMX2-CTNND1H3BSU7 103 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 AGRPO00253 132 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 VEGFDO43915 354 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 SNX2O60749 519 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 CDK14O94921 469 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 CPNE6O95741 557 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 GPR89BP0CG08 455 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 CD1CP29017 333 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 RBMS1P29558 406 aaKnown RBP12.73□□□□□ -0.37
HDAC1-209ENST00000484305 GPR3P46089 330 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 ERVPABLB-1P60509 514 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 CCZ1BP86790 482 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 CCZ1P86791 482 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-209ENST00000484305 CCDC173Q0VFZ6 552 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 TMEM115Q12893 351 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-209ENST00000484305 TAF1AQ15573 450 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-209ENST00000484305 PLA2G4EQ3MJ16 856 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 NKAIN2Q5VXU1 208 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 ZDHHC20Q5W0Z9 365 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 DENND5AQ6IQ26 1287 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 IYDQ6PHW0 289 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 ZNF574Q6ZN55 896 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-209ENST00000484305 ARHGEF18Q6ZSZ5 1173 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 RAB11FIP2Q7L804 512 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 PIM3Q86V86 326 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 ZNF761Q86XN6 746 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-209ENST00000484305 ZNF547Q8IVP9 402 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 SLITRK4Q8IW52 837 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 GDAP1Q8TB36 358 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 DTX3LQ8TDB6 740 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 ATG4AQ8WYN0 398 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 NAF1Q96HR8 494 aaKnown RBP12.73□□□□□ -0.37
HDAC1-209ENST00000484305 TBL1YQ9BQ87 522 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 STRADBQ9C0K7 418 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 SEMA6CQ9H3T2 930 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 LZTFL1Q9NQ48 299 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 PRDM8Q9NQV8 689 aa12.73□□□□□ -0.37
HDAC1-209ENST00000484305 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC1-209ENST00000484305 IGHV1OR21-1A0A087WYE8 117 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 CDRT15L2A8MXV6 281 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 PLD2O14939 933 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 KMOO15229 486 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 STX7O15400 261 aaKnown RBP12.72□□□□□ -0.37
HDAC1-209ENST00000484305 RRP8O43159 456 aaKnown RBP12.72□□□□□ -0.37
HDAC1-209ENST00000484305 PPFIA2O75334 1257 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 ZNF189O75820 626 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-209ENST00000484305 TNFSF15O95150 251 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 METTL18O95568 372 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 CCDC175P0C221 793 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 F3P13726 295 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 HGFP14210 728 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 ZNF7P17097 686 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-209ENST00000484305 LPOP22079 712 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-209ENST00000484305 ABCG1P45844 678 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 FASLGP48023 281 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 CLCNKAP51800 687 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 PCBP4P57723 403 aaKnown RBP12.72□□□□□ -0.37
HDAC1-209ENST00000484305 HHEXQ03014 270 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 CFHR1Q03591 330 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 INSCQ1MX18 579 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 PARP6Q2NL67 630 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 MAP9Q49MG5 647 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-209ENST00000484305 SEL1L2Q5TEA6 688 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 KCTD11Q693B1 232 aa12.72□□□□□ -0.37
HDAC1-209ENST00000484305 LRRC69Q6ZNQ3 347 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms