RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PECAM1P16284 738 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-221ENST00000483778 CD68P34810 354 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-221ENST00000483778 ARHGAP25P42331 645 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 UBE2IP63279 158 aaKnown RBP17.78■□□□□ 0.44
ATG4B-221ENST00000483778 CDK18Q07002 472 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 PDK1Q15118 436 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 ZNF547Q8IVP9 402 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 CACNA2D3Q8IZS8 1091 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-221ENST00000483778 GLYATL1Q969I3 302 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 RTP4Q96DX8 246 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 DPYSL5Q9BPU6 564 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 ARHGAP9Q9BRR9 750 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 MAK16Q9BXY0 300 aaKnown RBP17.78■□□□□ 0.44
ATG4B-221ENST00000483778 GOLPH3Q9H4A6 298 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 HAUS2Q9NVX0 235 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 TFR2Q9UP52 801 aa17.78■□□□□ 0.44
ATG4B-221ENST00000483778 PRR19A6NJB7 356 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 F5H423 210 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-221ENST00000483778 CHUKO15111 745 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 DUX1O43812 170 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 MFAP3LO75121 409 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 COMTP21964 271 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 PTPN3P26045 913 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 SLC19A1P41440 591 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 CDKN2BP42772 138 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 GFERP55789 205 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 WASHC5Q12768 1159 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 TAZQ16635 292 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 TEX44Q53QW1 395 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 DCAF12Q5T6F0 453 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 PRICKLE2Q7Z3G6 844 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 UNC5BQ8IZJ1 945 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 IL22RA1Q8N6P7 574 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 ZSCAN1Q8NBB4 408 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 GPR63Q9BZJ6 419 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 TRIM4Q9C037 500 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 OSGEPL1Q9H4B0 414 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 LCMT1Q9UIC8 334 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 DNAJC16Q9Y2G8 782 aa17.77■□□□□ 0.44
ATG4B-221ENST00000483778 LOC101059948A0A1B0GTJ6 334 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 NKX2-8O15522 239 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 RAD1O60671 282 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 NDST3O95803 873 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 BRAFP15056 766 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 ZNF7P17097 686 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-221ENST00000483778 TYRP1P17643 537 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 CHRNA4P43681 627 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 CLCNKAP51800 687 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 DCDC1P59894 354 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 PRKD1Q15139 912 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-221ENST00000483778 ZNF569Q5MCW4 686 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 LRRC38Q5VT99 294 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 KDELC1Q6UW63 502 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 SLC9B2Q86UD5 537 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 VSIG1Q86XK7 387 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 TRAM1L1Q8N609 369 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 TEKT5Q96M29 485 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 CCDC42Q96M95 316 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 HERPUD2Q9BSE4 406 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 ASPSCR1Q9BZE9 553 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 ZMYND15Q9H091 742 aa17.76■□□□□ 0.43
ATG4B-221ENST00000483778 ZNHIT6Q9NWK9 470 aaKnown RBP17.76■□□□□ 0.43
ATG4B-221ENST00000483778 KIR2DS5A0A0G2JLQ3 304 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 A0A0G2JNG1 304 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 CYSRT1A8MQ03 144 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 KIR2DS3K7RE56 304 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 XRCC1P18887 633 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-221ENST00000483778 RPL10P27635 214 aaKnown RBP17.75■□□□□ 0.43
ATG4B-221ENST00000483778 ATP1A2P50993 1020 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 TRIM14Q14142 442 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 KIR2DS5Q14953 304 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 SEPT7Q16181 437 aaKnown RBP17.75■□□□□ 0.43
ATG4B-221ENST00000483778 ATP13A5Q4VNC0 1218 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 KAZNQ674X7 775 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 C11orf96Q7Z7L8 435 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 RHOT1Q8IXI2 618 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 TTC30BQ8N4P2 665 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 RNF214Q8ND24 703 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 SH3KBP1Q96B97 665 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 ZSCAN5AQ9BUG6 496 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 C10orf88Q9H8K7 445 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 FBXO8Q9NRD0 319 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 NFKBIL1Q9UBC1 381 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-221ENST00000483778 TRIM10Q9UDY6 481 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 IL17BQ9UHF5 180 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 BSNQ9UPA5 3926 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 SPTBP11277 2137 aa17.75■□□□□ 0.43
ATG4B-221ENST00000483778 A0A0A6YYK5 440 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-221ENST00000483778 PPP1R12AO14974 1030 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-221ENST00000483778 GPR39O43194 453 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 CBFA2T2O43439 604 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 BUD23O43709 281 aaKnown RBP17.74■□□□□ 0.43
ATG4B-221ENST00000483778 UGT1A9O60656 530 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 CST8O60676 142 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 TPM3P06753 285 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 ZFXP17010 805 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-221ENST00000483778 UGT1A6P19224 532 aa17.74■□□□□ 0.43
ATG4B-221ENST00000483778 NFKB1P19838 968 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms