RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PELI3Q8N2H9 469 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 NXPE1Q8N323 547 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 FBXO39Q8N4B4 442 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 GPR26Q8NDV2 337 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CEP70Q8NHQ1 597 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 AGAP11Q8TF27 550 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 EXT2Q93063 718 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 RSPRY1Q96DX4 576 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-225ENST00000483495 PLEKHG4BQ96PX9 1271 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 BOCQ9BWV1 1114 aa13.12□□□□□ -0.31
CPNE1-225ENST00000483495 DUS2Q9NX74 493 aaKnown RBP13.12□□□□□ -0.31
CPNE1-225ENST00000483495 CHD9Q3L8U1 2897 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 TSPAN11A1L157 253 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 IQCF5A8MTL0 148 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 CDK14O94921 469 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 SIX3O95343 332 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-225ENST00000483495 SRPRAP08240 638 aaKnown RBP13.11□□□□□ -0.31
CPNE1-225ENST00000483495 RPS17P08708 135 aaKnown RBP13.11□□□□□ -0.31
CPNE1-225ENST00000483495 ADH5P11766 374 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 COX4I1P13073 169 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 GM2AP17900 193 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 PIK3R1P27986 724 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 RECQLP46063 649 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-225ENST00000483495 SH3BP2P78314 561 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 UGT3A2Q3SY77 523 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 PTRHD1Q6GMV3 140 aaKnown RBP13.11□□□□□ -0.31
CPNE1-225ENST00000483495 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 CLYBLQ8N0X4 340 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 POU5F2Q8N7G0 328 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 NAT16Q8N8M0 369 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 ASIC4Q96FT7 647 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 PPP1R36Q96LQ0 422 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 HEPHQ9BQS7 1158 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 MRGBPQ9NV56 204 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 CRLS1Q9UJA2 301 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 SLC27A6Q9Y2P4 619 aa13.11□□□□□ -0.31
CPNE1-225ENST00000483495 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
CPNE1-225ENST00000483495 MYO7AQ13402 2215 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 PEX11AO75192 247 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 ASLP04424 464 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 UGT1A6P19224 532 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 UGT1A1P22309 533 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 UGT1A4P22310 534 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 UGT1A3P35503 534 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 UGT1A5P35504 534 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 HERC3Q15034 1050 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-225ENST00000483495 KLHL32Q96NJ5 620 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 LENG8Q96PV6 779 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-225ENST00000483495 RTKNQ9BST9 563 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 CIPCQ9C0C6 399 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 SFXN1Q9H9B4 322 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 LATS2Q9NRM7 1088 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 B4GALT6Q9UBX8 382 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 PRSS21Q9Y6M0 314 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 WASF2Q9Y6W5 498 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-225ENST00000483495 IGLV3-16A0A075B6K0 115 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 RGSL1A5PLK6 1076 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 LRRC14BA6NHZ5 514 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 A8MX80 341 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 TTC34A8MYJ7 566 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 ADH1CP00326 375 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 C1SP09871 688 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 THRAP10827 490 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 ZNF30P17039 623 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 EEF1DP29692 281 aaKnown RBP13.1□□□□□ -0.31
CPNE1-225ENST00000483495 NNMTP40261 264 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 SPINT3P49223 89 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 DGKGP49619 791 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 HK3P52790 923 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 CDH13P55290 713 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 MXRA7P84157 204 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 LCP2Q13094 533 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 CRY1Q16526 586 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 TMEM198Q66K66 360 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 ANKS6Q68DC2 871 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 NXNQ6DKJ4 435 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 TMC5Q6UXY8 1006 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 GPSM1Q86YR5 675 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 SCUBE1Q8IWY4 988 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 NPAS3Q8IXF0 933 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 RP9Q8TA86 221 aaKnown RBP13.1□□□□□ -0.31
CPNE1-225ENST00000483495 DTX3LQ8TDB6 740 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 HCAR2Q8TDS4 363 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 ZNF483Q8TF39 744 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-225ENST00000483495 CYB5D2Q8WUJ1 264 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 SORCS1Q8WY21 1168 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 MYLIPQ8WY64 445 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 LRIG1Q96JA1 1093 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 ZBTB26Q9HCK0 441 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 SARS2Q9NP81 518 aaKnown RBP13.1□□□□□ -0.31
CPNE1-225ENST00000483495 ZDHHC3Q9NYG2 299 aa13.1□□□□□ -0.31
CPNE1-225ENST00000483495 KLHL42Q9P2K6 505 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms