RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ITFG1Q8TB96 612 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 FAM45AQ8TCE6 357 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 TDP1Q9NUW8 608 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 NPHS1O60500 1241 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 RNASEH1O60930 286 aaKnown RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 IPO13O94829 963 aaKnown RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 CHRM1P11229 460 aaPredicted RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 HNF1BP35680 557 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 NXNQ6DKJ4 435 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 SLC30A9Q6PML9 568 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 AFTPHQ6ULP2 937 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 ZNF783Q6ZMS7 281 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 Q6ZVU0 165 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 PIWIL4Q7Z3Z4 852 aaKnown RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 SDCCAG8Q86SQ7 713 aaPredicted RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 CPXM2Q8N436 756 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 KDM1BQ8NB78 822 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 GRIN3AQ8TCU5 1115 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 ZNF483Q8TF39 744 aaPredicted RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 CYB5D2Q8WUJ1 264 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 RETREG1Q9H6L5 497 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 IL17CQ9P0M4 197 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 C6orf203Q9P0P8 240 aaPredicted RBP14.35□□□□□ -0.11
CHD3-211ENST00000481999 PTGDR2Q9Y5Y4 395 aa14.35□□□□□ -0.11
CHD3-211ENST00000481999 PIKFYVEQ9Y2I7 2098 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ANTXRLA6NF34 631 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 NPIPB15A6NHN6 443 aaPredicted RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 CDC7O00311 574 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 GAPDHSO14556 408 aaPredicted RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 SUPT7LO94864 414 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 MTHFD2P13995 350 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 TYRP14679 529 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ATP5F1P24539 256 aaPredicted RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 BCL2L1Q07817 233 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 PFKFB4Q16877 469 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 TCEAL5Q5H9L2 206 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 TMC5Q6UXY8 1006 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 CHST14Q8NCH0 376 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ZFYVE19Q96K21 471 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 LMLNQ96KR4 655 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 BTBD9Q96Q07 612 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 KIAA1522Q9P206 1035 aaPredicted RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 PSMD13Q9UNM6 376 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 HELZP42694 1942 aaKnown RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 TRPC5OSA6NMA1 111 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 VCLP18206 1134 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 AQP4P55087 323 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ACAP2Q15057 778 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 TSNQ15631 228 aaKnown RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 PPP1R3AQ16821 1122 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 FOXB2Q5VYV0 432 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ARMC3Q5W041 872 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 DPY19L3Q6ZPD9 716 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ST13P4Q8IZP2 240 aaPredicted RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 PGAM4Q8N0Y7 254 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 PEX13Q92968 403 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 RCN3Q96D15 328 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 TSPAN17Q96FV3 270 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 CATSPER2Q96P56 530 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 CDRT15Q96T59 188 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ZDHHC6Q9H6R6 413 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ZBTB26Q9HCK0 441 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 PAPOLBQ9NRJ5 636 aaKnown RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 UTP6Q9NYH9 597 aaKnown RBP14.34□□□□□ -0.11
CHD3-211ENST00000481999 PACSIN3Q9UKS6 424 aa14.34□□□□□ -0.11
CHD3-211ENST00000481999 ATP6AP2A0A1C7CYW4 349 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 ATP6AP2O75787 350 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 PRAMEF1O95521 474 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 PTPN2P17706 415 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 OGNP20774 298 aaKnown RBP14.33□□□□□ -0.12
CHD3-211ENST00000481999 PBX2P40425 430 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 DNAJB13P59910 316 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 SULT2A1Q06520 285 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 MMEL1Q495T6 779 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 OGFRL1Q5TC84 451 aaPredicted RBP14.33□□□□□ -0.12
CHD3-211ENST00000481999 ZFP1Q6P2D0 407 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 KLC3Q6P597 504 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 GALNT7Q86SF2 657 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 PQLC1Q8N2U9 271 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 DCBLD1Q8N8Z6 715 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 ICA1LQ8NDH6 482 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
CHD3-211ENST00000481999 ACDQ96AP0 544 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 EFCAB1Q9HAE3 211 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 HECAQ9UBI9 543 aaPredicted RBP14.33□□□□□ -0.12
CHD3-211ENST00000481999 ASB1Q9Y576 335 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 NPEPPSL1A6NEC2 478 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 CLASP2O75122 1294 aaKnown RBP14.33□□□□□ -0.12
CHD3-211ENST00000481999 PIM1P11309 404 aaPredicted RBP14.33□□□□□ -0.12
CHD3-211ENST00000481999 HMGCLP35914 325 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 VIPR2P41587 438 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 THOP1P52888 689 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 FOXA1P55317 472 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 FLOT2Q14254 428 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 ZNF423Q2M1K9 1284 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 GRAMD1BQ3KR37 738 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 PIGGQ5H8A4 983 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 PSRC1Q6PGN9 363 aaPredicted RBP14.33□□□□□ -0.12
CHD3-211ENST00000481999 CPNE9Q8IYJ1 553 aa14.33□□□□□ -0.12
CHD3-211ENST00000481999 GPR65Q8IYL9 337 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms