RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CREB3L1Q96BA8 519 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ELMO3Q96BJ8 720 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ERMAPQ96PL5 475 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 RC3H2Q9HBD1 1191 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 POPDC3Q9HBV1 291 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ITM2CQ9NQX7 267 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FKBP14Q9NWM8 211 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 AK9Q5TCS8 1911 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CEP170BQ9Y4F5 1589 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 METTL18O95568 372 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 LGALS2P05162 132 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CTSHP09668 335 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 HLCSP50747 726 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CDH13P55290 713 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SRP54P61011 504 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 GALNT1Q10472 559 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 BOP1Q14137 746 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 NADK2Q4G0N4 442 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SEZ6Q53EL9 994 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PYDC2Q56P42 97 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FAM131AQ6UXB0 335 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 OAFQ86UD1 273 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 IZUMO1Q8IYV9 350 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PHACTR4Q8IZ21 702 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FNDC8Q8TC99 324 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 TPD52L3Q96J77 140 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PCBD2Q9H0N5 130 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CD93Q9NPY3 652 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PTTG3PQ9NZH4 202 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CNTN3Q9P232 1028 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ZNF282Q9UDV7 671 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 COG5Q9UP83 839 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 WASF2Q9Y6W5 498 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 RIC1Q4ADV7 1423 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 STX16-NPEPL1H3BU86 382 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 STX16O14662 325 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 DENRO43583 198 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 TSC22D2O75157 780 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 UGT2B4P06133 528 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 HNRNPLP14866 589 aaKnown RBP eCLIP6.11□□□□□ -1.436e-7■■■□□ 17.5
PRPF4B-205ENST00000480058 MPSTP25325 297 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 S100GP29377 79 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CAPZA1P52907 286 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 GBE1Q04446 702 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SREBF2Q12772 1141 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SMCO1Q147U7 214 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 CA9Q16790 459 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 VWA5B1Q5TIE3 1220 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SMIM5Q71RC9 77 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ADGRD2Q7Z7M1 963 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 TNS4Q8IZW8 715 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 LGI2Q8N0V4 545 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SLC34A3Q8N130 599 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 GLIS3Q8NEA6 775 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 BRSK1Q8TDC3 778 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 TWIST2Q8WVJ9 160 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 SMG7Q92540 1137 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 C11orf24Q96F05 449 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 FCRL2Q96LA5 508 aaPredicted RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 OSMRQ99650 979 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 ZDHHC7Q9NXF8 308 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 HACL1Q9UJ83 578 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 AGO1Q9UL18 857 aaKnown RBP6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 IQGAP1P46940 1657 aa6.11□□□□□ -1.43
PRPF4B-205ENST00000480058 PIGBOS1A0A0B4J2F0 54 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ATP6AP2A0A1C7CYW4 349 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 A0A1W2PP18 115 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 DCDC2CA8MYV0 355 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 TNFRSF11BO00300 401 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 DFNA5O60443 496 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ABCB7O75027 752 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ATP6AP2O75787 350 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CLDN9O95484 217 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 GSTT2P0CG29 244 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 GOT1P17174 413 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 HSD17B2P37059 387 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 IL10RBQ08334 325 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 LSAMPQ13449 338 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ALG11Q2TAA5 492 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 CELF3Q5SZQ8 465 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ABHD15Q6UXT9 468 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 XYLT1Q86Y38 959 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 JOSD2Q8TAC2 188 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 SLC47A1Q96FL8 570 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 OSBPL2Q9H1P3 480 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 STUB1Q9UNE7 303 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 IFT52Q9Y366 437 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 DUXAA6NLW8 204 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 MYCP01106 439 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 PGRP06401 933 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 E2F2Q14209 437 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 VARS2Q5ST30 1063 aaKnown RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 IL23RQ5VWK5 629 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ZNF248Q8NDW4 579 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 OR4A15Q8NGL6 344 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 EDEM1Q92611 657 aa6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
PRPF4B-205ENST00000480058 EBF3Q9H4W6 596 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms