RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 IMPDH1P20839 514 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 FDXRP22570 491 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 HOXD9P28356 352 aaPredicted RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 GABRB3P28472 473 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 PMLP29590 882 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 CPOXP36551 454 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 MRPL19P49406 292 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 RABGGTBP53611 331 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ALDH18A1P54886 795 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TAS2R39P59534 338 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 HERVK_113P63132 956 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 MXRA7P84157 204 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TAGLNQ01995 201 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 RPL6Q02878 288 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 GRIK2Q13002 908 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 STX5Q13190 355 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 NAA25Q14CX7 972 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TAF12Q16514 161 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 GSTA3Q16772 222 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 HSF5Q4G112 596 aaPredicted RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ARL13AQ5H913 290 aaPredicted RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TECRLQ5HYJ1 363 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 COQ5Q5HYK3 327 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 IRAK1BP1Q5VVH5 260 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 LYPLAL1Q5VWZ2 237 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ZDHHC20Q5W0Z9 365 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 UGT3A1Q6NUS8 523 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ZFP1Q6P2D0 407 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TTC23LQ6PF05 361 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ZCCHC23Q6ZST2 131 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TFAP2DQ7Z6R9 452 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 CTU1Q7Z7A3 348 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 DDX53Q86TM3 631 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ZNF354CQ86Y25 554 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 CPXM2Q8N436 756 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 NKAPQ8N5F7 415 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 EFHBQ8N7U6 833 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 GPATCH11Q8N954 259 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 DCAF4L2Q8NA75 395 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 KYQ8NBH2 561 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 RBM15BQ8NDT2 890 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 OR4L1Q8NH43 312 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 CEP70Q8NHQ1 597 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 USP33Q8TEY7 942 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TSPEARQ8WU66 669 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 IGSF8Q969P0 613 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 THOC1Q96FV9 657 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TMEM169Q96HH4 297 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 SCYL1Q96KG9 808 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ZNF778Q96MU6 729 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ZNF558Q96NG5 402 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 SEMA3CQ99985 751 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 APOL2Q9BQE5 337 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 C1QTNF3Q9BXJ4 246 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 ERVK-6Q9BXR3 956 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 C20orf27Q9GZN8 174 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 DERL2Q9GZP9 239 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 CCDC68Q9H2F9 335 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 MEAF6Q9HAF1 191 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 CD248Q9HCU0 757 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 IGSF5Q9NSI5 407 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 CATSPERZQ9NTU4 200 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 PIH1D1Q9NWS0 290 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 TAS2R13Q9NYV9 303 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 UBP1Q9NZI7 540 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 LMCD1Q9NZU5 365 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 MARCOQ9UEW3 520 aaPredicted RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 RUVBL2Q9Y230 463 aaKnown RBP6.08□□□□□ -1.44
CMSS1-203ENST00000478909 LRCH1Q9Y2L9 728 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 PCDHB1Q9Y5F3 818 aa6.08□□□□□ -1.44
CMSS1-203ENST00000478909 BBIP1A8MTZ0 92 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 PRR5-ARHGAP8B1AHC4 643 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.07□□□□□ -1.44
CMSS1-203ENST00000478909 H3BNC9 293 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 H3BS24 57 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 STX16-NPEPL1H3BU86 382 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 J3KR12 359 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 EIF3FO00303 357 aaPredicted RBP6.07□□□□□ -1.44
CMSS1-203ENST00000478909 STX16O14662 325 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 HGSO14964 777 aaPredicted RBP6.07□□□□□ -1.44
CMSS1-203ENST00000478909 NVLO15381 856 aaKnown RBP6.07□□□□□ -1.44
CMSS1-203ENST00000478909 PHGDHO43175 533 aaKnown RBP6.07□□□□□ -1.44
CMSS1-203ENST00000478909 ITM2AO43736 263 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 DLX3O60479 287 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 KERAO60938 352 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 CNTN5O94779 1100 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 PIGNO95427 931 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 VNN2O95498 520 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 ESR1P03372 595 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 RHOCP08134 193 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 FGF4P08620 206 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 KITP10721 976 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 COX4I1P13073 169 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 ZNF37AP17032 561 aaPredicted RBP6.07□□□□□ -1.44
CMSS1-203ENST00000478909 HMGA1P17096 107 aaKnown RBP6.07□□□□□ -1.44
CMSS1-203ENST00000478909 ATP6V1C1P21283 382 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 LPOP22079 712 aaPredicted RBP6.07□□□□□ -1.44
CMSS1-203ENST00000478909 NFKBIAP25963 317 aa6.07□□□□□ -1.44
CMSS1-203ENST00000478909 DDX6P26196 483 aaKnown RBP eCLIP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms