RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 OR1E3Q8WZA6 343 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 CERS2Q96G23 380 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 TXLNGYQ9BZA5 131 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 CAAP1Q9H8G2 361 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 TRIM39Q9HCM9 518 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 PARD6AQ9NPB6 346 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 ATXN10Q9UBB4 475 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 KLF15Q9UIH9 416 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 TMEM98Q9Y2Y6 226 aa19.74■□□□□ 0.75
ACTB-210ENST00000477812 PCYT1BQ9Y5K3 369 aaPredicted RBP19.74■□□□□ 0.75
ACTB-210ENST00000477812 ZFHX2Q9C0A1 2572 aaPredicted RBP19.73■□□□□ 0.75
ACTB-210ENST00000477812 LNP1A1A4G5 178 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 KHNYNO15037 678 aaKnown RBP19.73■□□□□ 0.75
ACTB-210ENST00000477812 CD3EAPO15446 510 aaKnown RBP19.73■□□□□ 0.75
ACTB-210ENST00000477812 SSTR1P30872 391 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 NAA30Q147X3 362 aaPredicted RBP19.73■□□□□ 0.75
ACTB-210ENST00000477812 ZNF423Q2M1K9 1284 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 UBAP2Q5T6F2 1119 aaKnown RBP19.73■□□□□ 0.75
ACTB-210ENST00000477812 CERS6Q6ZMG9 384 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 CNTN4Q8IWV2 1026 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 ZDHHC5Q9C0B5 715 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 LRRC4CQ9HCJ2 640 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 C20orf96Q9NUD7 363 aaPredicted RBP19.73■□□□□ 0.75
ACTB-210ENST00000477812 ZDHHC3Q9NYG2 299 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 NINJ2Q9NZG7 142 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 NCDNQ9UBB6 729 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.73■□□□□ 0.75
ACTB-210ENST00000477812 DGKBQ9Y6T7 804 aa19.73■□□□□ 0.75
ACTB-210ENST00000477812 PRSS38A1L453 326 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 ARHGAP33O14559 1287 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 CHUKO15111 745 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 SGTAO43765 313 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 VEGFDO43915 354 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 DNAJC6O75061 913 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 IVLP07476 585 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 GSTA2P09210 222 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 ERVK-10P10266 1014 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 NME1P15531 152 aaKnown RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 ZNF8P17098 575 aaPredicted RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 OGNP20774 298 aaKnown RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 SRP54P61011 504 aaKnown RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 SPEM2Q0P670 501 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 ITIH4Q14624 930 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 SHBQ15464 509 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 CSRP2Q16527 193 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 FASTKD1Q53R41 847 aaKnown RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 HSP90AA5PQ58FG0 334 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 DOK6Q6PKX4 331 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 ENPP7Q6UWV6 458 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 PACS1Q6VY07 963 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 TAS2R42Q7RTR8 314 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 LDB1Q86U70 411 aaPredicted RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 KCNMB4Q86W47 210 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 CILP2Q8IUL8 1156 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 GPR161Q8N6U8 529 aaKnown RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 RASGEF1AQ8N9B8 481 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.72■□□□□ 0.752e-10■■■■■ 70.2
ACTB-210ENST00000477812 COPS8Q99627 209 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 BOCQ9BWV1 1114 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 OR2AG1Q9H205 316 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 CDC42EP4Q9H3Q1 356 aaKnown RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 MRPL40Q9NQ50 206 aaKnown RBP19.72■□□□□ 0.75
ACTB-210ENST00000477812 SEMA4GQ9NTN9 838 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 KLQ9UEF7 1012 aa19.72■□□□□ 0.75
ACTB-210ENST00000477812 RIF1Q5UIP0 2472 aaKnown RBP19.71■□□□□ 0.75
ACTB-210ENST00000477812 TCRBV9S1A1TA0A576 114 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 GPR89AB7ZAQ6 455 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 CSF2P04141 144 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 GPR89BP0CG08 455 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 TMEM115Q12893 351 aaPredicted RBP19.71■□□□□ 0.75
ACTB-210ENST00000477812 SF3A2Q15428 464 aaKnown RBP19.71■□□□□ 0.75
ACTB-210ENST00000477812 AARS2Q5JTZ9 985 aaKnown RBP19.71■□□□□ 0.75
ACTB-210ENST00000477812 LYPLAL1Q5VWZ2 237 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 ZNF470Q6ECI4 717 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 MRNIPQ6NTE8 343 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 ZNF449Q6P9G9 518 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 CYS1Q717R9 158 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 ZNF547Q8IVP9 402 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 LMNTD2Q8IXW0 634 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 DCLK2Q8N568 766 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 GDAP1Q8TB36 358 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 SCG3Q8WXD2 468 aaKnown RBP19.71■□□□□ 0.75
ACTB-210ENST00000477812 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.71■□□□□ 0.751e-15■■■■■ 133.4
ACTB-210ENST00000477812 TSACCQ96A04 125 aaPredicted RBP19.71■□□□□ 0.75
ACTB-210ENST00000477812 NUSAP1Q9BXS6 441 aaKnown RBP19.71■□□□□ 0.75
ACTB-210ENST00000477812 PARD6BQ9BYG5 372 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 TCEAL2Q9H3H9 227 aaPredicted RBP19.71■□□□□ 0.75
ACTB-210ENST00000477812 RAB21Q9UL25 225 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 TMEM131Q92545 1883 aa19.71■□□□□ 0.75
ACTB-210ENST00000477812 DNAH14Q0VDD8 3507 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 RALGAPA1Q6GYQ0 2036 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 GVINP1Q7Z2Y8 2422 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 NUAK1O60285 661 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 ENGP17813 658 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 SLC1A2P43004 574 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 RXRGP48443 463 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 TTPAP49638 278 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 HK3P52790 923 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 CTSCP53634 463 aa19.7■□□□□ 0.74
ACTB-210ENST00000477812 SLMAPQ14BN4 828 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms