RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TNKS2Q9H2K2 1166 aa7.87□□□□□ -1.15
VMA21-203ENST00000477649 BRD9Q9H8M2 597 aa7.87□□□□□ -1.15
VMA21-203ENST00000477649 ZNF395Q9H8N7 513 aaPredicted RBP7.87□□□□□ -1.15
VMA21-203ENST00000477649 SPATS2LQ9NUQ6 558 aaKnown RBP7.87□□□□□ -1.15
VMA21-203ENST00000477649 TMEM45AQ9NWC5 275 aa7.87□□□□□ -1.15
VMA21-203ENST00000477649 ZDHHC3Q9NYG2 299 aa7.87□□□□□ -1.15
VMA21-203ENST00000477649 DEC1Q9P2X7 70 aa7.87□□□□□ -1.15
VMA21-203ENST00000477649 IL36AQ9UHA7 158 aa7.87□□□□□ -1.15
VMA21-203ENST00000477649 RNF112Q9ULX5 631 aa7.87□□□□□ -1.15
VMA21-203ENST00000477649 WNT6Q9Y6F9 365 aa7.87□□□□□ -1.15
VMA21-203ENST00000477649 IGLV3-16A0A075B6K0 115 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 UPK3BL1B0FP48 263 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 UPK3BL2E5RIL1 263 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 GIPC1O14908 333 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 PER2O15055 1255 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 RAD51BO15315 384 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 GRID2O43424 1007 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ZBTB14O43829 449 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 SUPT7LO94864 414 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CLDN7O95471 211 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CBX6O95503 412 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CHEK2O96017 543 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CYP17A1P05093 508 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ENO2P09104 434 aaPredicted RBP7.86□□□□□ -1.15
VMA21-203ENST00000477649 GSTM1P09488 218 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ALPIP09923 528 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 OR56A5P0C7T3 313 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 MPSTP25325 297 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ARRB2P32121 409 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CTSOP43234 321 aaPredicted RBP7.86□□□□□ -1.15
VMA21-203ENST00000477649 NRIP1P48552 1158 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 PIK3CGP48736 1102 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 SPINT3P49223 89 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ATP4BP51164 291 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CCR3P51677 355 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CLCN7P51798 805 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 PKNOX1P55347 436 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 NTHL1P78549 312 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 GSTM4Q03013 218 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ELP6Q0PNE2 266 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 LCP2Q13094 533 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 SHHQ15465 462 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CTSL3PQ5NE16 218 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 MAVSQ7Z434 540 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 DSG4Q86SJ6 1040 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CUZD1Q86UP6 607 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 PIM3Q86V86 326 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 NLRP8Q86W28 1048 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 GPSM1Q86YR5 675 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 MYO1HQ8N1T3 1032 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 PTGR2Q8N8N7 351 aaPredicted RBP7.86□□□□□ -1.15
VMA21-203ENST00000477649 TMIEQ8NEW7 156 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 RP9Q8TA86 221 aaKnown RBP7.86□□□□□ -1.15
VMA21-203ENST00000477649 RIN3Q8TB24 985 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ITFG1Q8TB96 612 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CD200R1Q8TD46 325 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 FUBP1Q96AE4 644 aaKnown RBP7.86□□□□□ -1.15
VMA21-203ENST00000477649 MCUR1Q96AQ8 359 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 PTERQ96BW5 349 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 EID2BQ96D98 161 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 MRPL38Q96DV4 380 aaKnown RBP7.86□□□□□ -1.15
VMA21-203ENST00000477649 PPP1R16AQ96I34 528 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 RPL10LQ96L21 214 aaKnown RBP7.86□□□□□ -1.15
VMA21-203ENST00000477649 MRGPRX3Q96LB0 322 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 MAGEB10Q96LZ2 347 aaPredicted RBP7.86□□□□□ -1.15
VMA21-203ENST00000477649 ZSWIM3Q96MP5 696 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 EBF4Q9BQW3 602 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 LINC00597Q9H2U6 94 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 GSTO2Q9H4Y5 243 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ZDHHC6Q9H6R6 413 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 MEAF6Q9HAF1 191 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 SLC28A3Q9HAS3 691 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 RDH14Q9HBH5 336 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ZFP14Q9HCL3 533 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 BPIFA1Q9NP55 256 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ARL8BQ9NVJ2 186 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ELOVL2Q9NXB9 296 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 GTSE1Q9NYZ3 720 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 SLCO3A1Q9UIG8 710 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 ZDHHC2Q9UIJ5 367 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 CDH7Q9ULB5 785 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 FAM50BQ9Y247 325 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 MED16Q9Y2X0 877 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 TRAF6Q9Y4K3 522 aa7.86□□□□□ -1.15
VMA21-203ENST00000477649 EDDM13A0A1B0GTR0 161 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 NPIPB15A6NHN6 443 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 PRR5-ARHGAP8B1AHC4 643 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 B2RBV5 119 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 SUPT3HB4E1H0 165 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 BTN3A1O00481 513 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 GAPDHSO14556 408 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 HGSO14964 777 aaPredicted RBP7.85□□□□□ -1.15
VMA21-203ENST00000477649 SLC16A5O15375 505 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 GSC2O15499 205 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 TULP3O75386 442 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 SUPT3HO75486 399 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ARHGEF15O94989 841 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 TSPAN12O95859 305 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 UGT2B4P06133 528 aa7.85□□□□□ -1.15
VMA21-203ENST00000477649 ENO1P06733 434 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms