RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 IFFO1Q0D2I5 559 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 SFSWAPQ12872 951 aaKnown RBP9.19□□□□□ -0.94
PGK1-204ENST00000477335 SGCGQ13326 291 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 PDE1CQ14123 709 aaPredicted RBP9.19□□□□□ -0.94
PGK1-204ENST00000477335 ZNF460Q14592 562 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 RASA2Q15283 850 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 TMED2Q15363 201 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 KRT71Q3SY84 523 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 GPR33Q49SQ1 333 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 TTMPQ5BVD1 217 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 TNFAIP8L3Q5GJ75 292 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 GRTP1Q5TC63 336 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 MRNIPQ6NTE8 343 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 LAYNQ6UX15 382 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 XKR5Q6UX68 686 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 KIAA0408Q6ZU52 694 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 DET1Q7L5Y6 550 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 GALNT7Q86SF2 657 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 ADGRG6Q86SQ4 1221 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 PIM3Q86V86 326 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 KRT222Q8N1A0 295 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 DCLK2Q8N568 766 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 CLDN19Q8N6F1 224 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 DDHD1Q8NEL9 900 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 CALML6Q8TD86 181 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 CDKL2Q92772 493 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 VPS39Q96JC1 886 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 SERAC1Q96JX3 654 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 SLC6A18Q96N87 628 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 GPR22Q99680 433 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 SLC30A3Q99726 388 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 TEX101Q9BY14 249 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 CDH19Q9H159 772 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 RHOJQ9H4E5 214 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 TMBIM4Q9HC24 238 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 PSMC3IPQ9P2W1 217 aaPredicted RBP9.19□□□□□ -0.94
PGK1-204ENST00000477335 TBK1Q9UHD2 729 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 CRLS1Q9UJA2 301 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 ZNF180Q9UJW8 692 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 PNMA8BQ9ULN7 279 aaPredicted RBP9.19□□□□□ -0.94
PGK1-204ENST00000477335 TMEM98Q9Y2Y6 226 aa9.19□□□□□ -0.94
PGK1-204ENST00000477335 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 CCDC163A0A0D9SF12 145 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 FAM95CA0A1B0GW59 222 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 UBA6A0AVT1 1052 aaPredicted RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 TRIM49D1C9J1S8 452 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 H3BQF6 201 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 LILRB5O75023 590 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 NIPSNAP2O75323 286 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 WISP3O95389 354 aaPredicted RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 TOP3BO95985 862 aaKnown RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 ALDOAP04075 364 aaKnown RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 WNT1P04628 370 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 INHBAP08476 426 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 ITGA2BP08514 1039 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 SP9P0CG40 484 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 CREB1P16220 341 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 HNRNPA2B1P22626 353 aaKnown RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 MAOBP27338 520 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 TEAD1P28347 426 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 FMO4P31512 558 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 PTGER3P43115 390 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 MAGEA12P43365 314 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 POLD2P49005 469 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 EIF3BP55884 814 aaKnown RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 TAS2R39P59534 338 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 PFN3P60673 137 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 RPL6Q02878 288 aaKnown RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 ITGA9Q13797 1035 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 ITIH4Q14624 930 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 USP39Q53GS9 565 aaKnown RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 MROH9Q5TGP6 573 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 SH2D5Q6ZV89 423 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 USP34Q70CQ2 3546 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 ARMCX6Q7L4S7 300 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 CMC1Q7Z7K0 106 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 SDCCAG8Q86SQ7 713 aaPredicted RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 LONP2Q86WA8 852 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 CEP97Q8IW35 865 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 LMNTD2Q8IXW0 634 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 TMEFF1Q8IYR6 380 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 SLC22A18ASQ8N1D0 253 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 RASGEF1AQ8N9B8 481 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 DENND6BQ8NEG7 585 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 OR13H1Q8NG92 308 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 GIMAP7Q8NHV1 300 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 C1orf216Q8TAB5 229 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 FAM136AQ96C01 138 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 ULK4Q96C45 1275 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 AARSD1Q9BTE6 412 aaKnown RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 ROPN1BQ9BZX4 212 aaPredicted RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 ROPN1Q9HAT0 212 aaPredicted RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 INTS10Q9NVR2 710 aaKnown RBP9.18□□□□□ -0.94
PGK1-204ENST00000477335 ATXN10Q9UBB4 475 aa9.18□□□□□ -0.94
PGK1-204ENST00000477335 A0A1W2PPC4 97 aa9.17□□□□□ -0.94
PGK1-204ENST00000477335 A0A1W2PR77 199 aa9.17□□□□□ -0.94
PGK1-204ENST00000477335 TMEM202A6NGA9 273 aa9.17□□□□□ -0.94
PGK1-204ENST00000477335 PRMT5O14744 637 aaPredicted RBP9.17□□□□□ -0.94
PGK1-204ENST00000477335 TPP1O14773 563 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms