RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 ACSL6Q9UKU0 697 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 PHTF1Q9UMS5 762 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 ABCA12Q86UK0 2595 aa11.51□□□□□ -0.57
LSM2-212ENST00000477182 COL27A1Q8IZC6 1860 aaPredicted RBP11.51□□□□□ -0.57
LSM2-212ENST00000477182 LY6G6EA0A0G2JKS1 128 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 A0A1W2PQ67 120 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 ANKRD66B4E2M5 251 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 K7ESM1 405 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 SMAPO00193 183 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 SLC7A4O43246 635 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 AVILO75366 819 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 KRT38O76015 456 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 FGF1P05230 155 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 ALPIP09923 528 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 XPAP23025 273 aaPredicted RBP11.5□□□□□ -0.57
LSM2-212ENST00000477182 MAT2AP31153 395 aaKnown RBP11.5□□□□□ -0.57
LSM2-212ENST00000477182 CASRP41180 1078 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 SESN2P58004 480 aaPredicted RBP11.5□□□□□ -0.57
LSM2-212ENST00000477182 RPL26P61254 145 aaKnown RBP11.5□□□□□ -0.57
LSM2-212ENST00000477182 CNTN1Q12860 1018 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 CDH17Q12864 832 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 IGFBP7Q16270 282 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 HIF1AQ16665 826 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 FNBP1LQ5T0N5 605 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 CERCAMQ5T4B2 595 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 DENND2CQ68D51 928 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 ZCCHC8Q6NZY4 707 aaKnown RBP11.5□□□□□ -0.57
LSM2-212ENST00000477182 TRIM69Q86WT6 500 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 GSPT2Q8IYD1 628 aaKnown RBP11.5□□□□□ -0.57
LSM2-212ENST00000477182 MYRIPQ8NFW9 859 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 HCAR2Q8TDS4 363 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 SERPINB12Q96P63 405 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 ARNT2Q9HBZ2 717 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 XAB2Q9HCS7 855 aaKnown RBP11.5□□□□□ -0.57
LSM2-212ENST00000477182 NFU1Q9UMS0 254 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 RPL26L1Q9UNX3 145 aaKnown RBP11.5□□□□□ -0.57
LSM2-212ENST00000477182 SRPK3Q9UPE1 567 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 U3KQA8 63 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
LSM2-212ENST00000477182 ZNF106Q9H2Y7 1883 aaKnown RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 ITPR2Q14571 2701 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 A0A0J9YYE9 177 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 CPED1A4D0V7 1026 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 NOBOXO60393 691 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 BANF1O75531 89 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 TRBC1P01850 177 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 MYBL2P10244 700 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 LIPCP11150 499 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 MLNP12872 115 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 MGAT1P26572 445 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 TNFRSF8P28908 595 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 ECHS1P30084 290 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 SLC5A2P31639 672 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 DRD3P35462 400 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 ABL2P42684 1182 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 MAGEA3P43357 314 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 NEK3P51956 506 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 ARL4CP56559 192 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 HNRNPKP61978 463 aaKnown RBP eCLIP11.49□□□□□ -0.57
LSM2-212ENST00000477182 VSNL1P62760 191 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 POLR2LP62875 67 aaKnown RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 CRADDP78560 199 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 EIF3IQ13347 325 aaKnown RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 POU6F1Q14863 301 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 UGP2Q16851 508 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 SKIDA1Q1XH10 827 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 BBS9Q3SYG4 887 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 MSS51Q4VC12 460 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 MANEAQ5SRI9 462 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 PIP5KL1Q5T9C9 394 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 USP45Q70EL2 814 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 ERN2Q76MJ5 926 aaKnown RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 TTC7BQ86TV6 843 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 CCDC25Q86WR0 208 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 PTRH1Q86Y79 214 aaKnown RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 BLOC1S5Q8TDH9 187 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 HDAC8Q9BY41 377 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 PARD6BQ9BYG5 372 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 FRMD8Q9BZ67 464 aaPredicted RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 FAM129AQ9BZQ8 928 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 PCDH12Q9NPG4 1184 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 PLEKHB1Q9UF11 243 aaPredicted RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 MTRF1LQ9UGC7 380 aaKnown RBP11.49□□□□□ -0.57
LSM2-212ENST00000477182 ITM2BQ9Y287 266 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 PCDHGA4Q9Y5G9 962 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
LSM2-212ENST00000477182 CACNA1DQ01668 2161 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 A0A0U1RQS6 177 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 EME2A4GXA9 379 aaPredicted RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 NPIPB15A6NHN6 443 aaPredicted RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 A8MX80 341 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 AP3B1O00203 1094 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 PLD2O14939 933 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 CTIFO43310 598 aaKnown RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 PLRG1O43660 514 aaKnown RBP11.48□□□□□ -0.57
LSM2-212ENST00000477182 SLC4A1P02730 911 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 ADRB3P13945 408 aa11.48□□□□□ -0.57
LSM2-212ENST00000477182 NPY2RP49146 381 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms