RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 NFU1Q9UMS0 254 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 CHMP2BQ9UQN3 213 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 BTBD3Q9Y2F9 522 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 TMEM98Q9Y2Y6 226 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 PCYT1BQ9Y5K3 369 aaPredicted RBP14.26□□□□□ -0.13
CCNL1-217ENST00000476367 ARID1BQ8NFD5 2236 aaPredicted RBP14.26□□□□□ -0.13
CCNL1-217ENST00000476367 TRBV5-4A0A0C4DH59 114 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 PRSS38A1L453 326 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 FLRT2O43155 660 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 SH3BP5O60239 455 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 PCDHGA12O60330 932 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 RASGRP1O95267 797 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 FOXN2P32314 431 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 HK3P52790 923 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 ARL4CP56559 192 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 PDE1BQ01064 536 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 C1orf61Q13536 156 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 SEMA3AQ14563 771 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 PRRT3Q5FWE3 981 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 STEAP4Q687X5 459 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 MARK2Q7KZI7 788 aaKnown RBP14.26□□□□□ -0.13
CCNL1-217ENST00000476367 DEFB124Q8NES8 71 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 PPHLN1Q8NEY8 458 aaKnown RBP14.26□□□□□ -0.13
CCNL1-217ENST00000476367 LMX1AQ8TE12 382 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 STAMBPL1Q96FJ0 436 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 CAMK1GQ96NX5 476 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 LRRC61Q9BV99 259 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 PHACTR1Q9C0D0 580 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 MARCH4Q9P2E8 410 aaPredicted RBP14.26□□□□□ -0.13
CCNL1-217ENST00000476367 PCDHGB2Q9Y5G2 931 aa14.26□□□□□ -0.13
CCNL1-217ENST00000476367 OAS3Q9Y6K5 1087 aaKnown RBP14.26□□□□□ -0.13
CCNL1-217ENST00000476367 DCDC2BA2VCK2 349 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 SRP72O76094 671 aaKnown RBP14.25□□□□□ -0.13
CCNL1-217ENST00000476367 USP1O94782 785 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 PRAMEF1O95521 474 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 HOXC4P09017 264 aaPredicted RBP14.25□□□□□ -0.13
CCNL1-217ENST00000476367 DGKAP23743 735 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 BLKP51451 505 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 GPX6P59796 221 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 VSNL1P62760 191 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 NFATC2Q13469 925 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 CUL1Q13616 776 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 CRYMQ14894 314 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 SUZ12Q15022 739 aaKnown RBP14.25□□□□□ -0.13
CCNL1-217ENST00000476367 SMAD1Q15797 465 aaKnown RBP14.25□□□□□ -0.13
CCNL1-217ENST00000476367 SKIDA1Q1XH10 827 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 INAVAQ3KP66 663 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 ZNF648Q5T619 568 aaPredicted RBP14.25□□□□□ -0.13
CCNL1-217ENST00000476367 ARMC3Q5W041 872 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 ZDHHC20Q5W0Z9 365 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 PSAPL1Q6NUJ1 521 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 UNC5AQ6ZN44 842 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 PHYKPLQ8IUZ5 450 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 FBXO36Q8NEA4 188 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 GDAP1Q8TB36 358 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 GLYATL1Q969I3 302 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 LRRC39Q96DD0 335 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 SGSM3Q96HU1 749 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 RTKNQ9BST9 563 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 TXLNGYQ9BZA5 131 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 FAM96AQ9H5X1 160 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 CARS2Q9HA77 564 aaKnown RBP14.25□□□□□ -0.13
CCNL1-217ENST00000476367 MAD1L1Q9Y6D9 718 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 RPS6KL1Q9Y6S9 549 aa14.25□□□□□ -0.13
CCNL1-217ENST00000476367 ARHGEF17Q96PE2 2063 aaPredicted RBP14.25□□□□□ -0.13
CCNL1-217ENST00000476367 MAGEB16A2A368 324 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 GOLGA8KD6RF30 607 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 GOLGA8TH3BQL2 631 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 AQP9O43315 295 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 MTX2O75431 263 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 SLC25A14O95258 325 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-217ENST00000476367 GOT2P00505 430 aaKnown RBP14.24□□□□□ -0.13
CCNL1-217ENST00000476367 CEACAM5P06731 702 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 CELA2BP08218 269 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-217ENST00000476367 F7P08709 466 aaPredicted RBP14.24□□□□□ -0.13
CCNL1-217ENST00000476367 CTSEP14091 401 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 SDHBP21912 280 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 TNFRSF8P28908 595 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 MC4RP32245 332 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 HADHAP40939 763 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 GRK6P43250 576 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 GNPDA1P46926 289 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 B4GALNT1Q00973 533 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 PDPK2PQ6A1A2 396 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 CASC4Q6P4E1 433 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 TRMT10BQ6PF06 316 aaKnown RBP14.24□□□□□ -0.13
CCNL1-217ENST00000476367 NLRP9Q7RTR0 991 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 KANSL1Q7Z3B3 1105 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 RELL1Q8IUW5 271 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 IFT20Q8IY31 132 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 ZBED8Q8IZ13 594 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 EID2Q8N6I1 236 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 RHBDD1Q8TEB9 315 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 NAT14Q8WUY8 206 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 BTN2A2Q8WVV5 523 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 FAM129AQ9BZQ8 928 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 SAYSD1Q9NPB0 183 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 DLL3Q9NYJ7 618 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 SPASTQ9UBP0 616 aa14.24□□□□□ -0.13
CCNL1-217ENST00000476367 SUFUQ9UMX1 484 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms