RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CCHCR1Q8TD31 782 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 NCSTNQ92542 709 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 RTP4Q96DX8 246 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 RNF31Q96EP0 1072 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 TEKT5Q96M29 485 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 DDA1Q9BW61 102 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 SPATA16Q9BXB7 569 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 CARD9Q9H257 536 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 GOLPH3Q9H4A6 298 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 RMI1Q9H9A7 625 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 GLOD4Q9HC38 313 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 BPIFA1Q9NP55 256 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 IL26Q9NPH9 171 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 FBXO8Q9NRD0 319 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 KLC4Q9NSK0 619 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 UBP1Q9NZI7 540 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 PKD2L2Q9NZM6 624 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 AKAP7Q9P0M2 348 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-207ENST00000475549 CPNE7Q9UBL6 633 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 DNPEPQ9ULA0 475 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 TFR2Q9UP52 801 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 WDR37Q9Y2I8 494 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF711Q9Y462 761 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 PCDHB11Q9Y5F2 797 aa6.93□□□□□ -1.3
HDAC3-207ENST00000475549 SHROOM3Q8TF72 1996 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 KIR2DS5A0A0G2JLQ3 304 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 A0A0G2JNG1 304 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 LOC101059948A0A1B0GTJ6 334 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 KIR2DS3K7RE56 304 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 GPR39O43194 453 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 ZW10O43264 779 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 SUV39H1O43463 412 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 DUX1O43812 170 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 SLC28A2O43868 658 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 KIF1CO43896 1103 aaKnown RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 RAD1O60671 282 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 MFAP3LO75121 409 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 PMPCBO75439 489 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 C9P02748 559 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 KRT1P04264 644 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 TNNT1P13805 278 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF28P17035 718 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 ZNF7P17097 686 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 XRCC1P18887 633 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 CA4P22748 312 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 F8A1P23610 371 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 RPL10P27635 214 aaKnown RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 HMGCLP35914 325 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 SLC1A1P43005 524 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 LEPRP48357 1165 aaKnown RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 MARCKSL1P49006 195 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 EPHA4P54764 986 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 DRG2P55039 364 aaKnown RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 GFERP55789 205 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 DCDC1P59894 354 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 SH3BP2P78314 561 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 KIR2DS5Q14953 304 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 PDK1Q15118 436 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 SLC14A2Q15849 920 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 PLA2G4EQ3MJ16 856 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 ATP13A5Q4VNC0 1218 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 DCAF12Q5T6F0 453 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 CRTC3Q6UUV7 619 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 KDELC1Q6UW63 502 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 ABRAXAS1Q6UWZ7 409 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 SLC9B2Q86UD5 537 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 FAM129CQ86XR2 697 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 RFX6Q8HWS3 928 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 CACNA2D3Q8IZS8 1091 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 TTC30BQ8N4P2 665 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 NAT14Q8WUY8 206 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 GLYATL1Q969I3 302 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 AHCYL2Q96HN2 611 aaKnown RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 OXNAD1Q96HP4 312 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 MRGPRX2Q96LB1 330 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 CCDC42Q96M95 316 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 DPYSL5Q9BPU6 564 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 GORASP1Q9BQQ3 440 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 HERPUD2Q9BSE4 406 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 ZSCAN5AQ9BUG6 496 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 MAK16Q9BXY0 300 aaKnown RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 ASPSCR1Q9BZE9 553 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 C10orf88Q9H8K7 445 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 SLC40A1Q9NP59 571 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 GEMIN8Q9NWZ8 242 aaKnown RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 SIDT1Q9NXL6 827 aaKnown RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 NFKBIL1Q9UBC1 381 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-207ENST00000475549 KLHL3Q9UH77 587 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 IL17BQ9UHF5 180 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 LCMT1Q9UIC8 334 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 DNAJC16Q9Y2G8 782 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 ALG6Q9Y672 507 aa6.92□□□□□ -1.3
HDAC3-207ENST00000475549 UBR5O95071 2799 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 TLN1Q9Y490 2541 aaKnown RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 SPENQ96T58 3664 aaKnown RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 A0A0A6YYK5 440 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-207ENST00000475549 OR5K4A6NMS3 321 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 OR52A4PA6NMU1 304 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 GPR89AB7ZAQ6 455 aa6.91□□□□□ -1.3
HDAC3-207ENST00000475549 F5H423 210 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms