RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 RCOR3Q9P2K3 495 aaPredicted RBP15.44■□□□□ 0.06
SRRT-209ENST00000474896 MRPS18BQ9Y676 258 aaKnown RBP15.44■□□□□ 0.06
SRRT-209ENST00000474896 FLNCQ14315 2725 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 OR5K4A6NMS3 321 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 NUAK1O60285 661 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 CA4P22748 312 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 RPL26P61254 145 aaKnown RBP15.43■□□□□ 0.06
SRRT-209ENST00000474896 FOXM1Q08050 763 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 SEPT6Q14141 434 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 PAFAH1B3Q15102 231 aaKnown RBP15.43■□□□□ 0.06
SRRT-209ENST00000474896 IFI16Q16666 785 aaKnown RBP15.43■□□□□ 0.06
SRRT-209ENST00000474896 ATP13A4Q4VNC1 1196 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 ANKRD20A8PQ5CZ79 823 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 HENMT1Q5T8I9 393 aaKnown RBP15.43■□□□□ 0.06
SRRT-209ENST00000474896 NCBP2-AS2Q69YL0 99 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 RAD9BQ6WBX8 426 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 LRRC8AQ8IWT6 810 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 ESX1Q8N693 406 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 FAM71BQ8TC56 605 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 CCHCR1Q8TD31 782 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 TSGA13Q96PP4 275 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 PLEKHG4BQ96PX9 1271 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 LYSMD1Q96S90 227 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 NUP85Q9BW27 656 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 EPB41L1Q9H4G0 881 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 ARFGAP3Q9NP61 516 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 KLC4Q9NSK0 619 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 HAUS2Q9NVX0 235 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 PKD2L2Q9NZM6 624 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 ATXN10Q9UBB4 475 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 AMACRQ9UHK6 382 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 ANAPC7Q9UJX3 599 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 RPL26L1Q9UNX3 145 aaKnown RBP15.43■□□□□ 0.06
SRRT-209ENST00000474896 RPS6KL1Q9Y6S9 549 aa15.43■□□□□ 0.06
SRRT-209ENST00000474896 RGSL1A5PLK6 1076 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 PRR19A6NJB7 356 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 ANKRD66B4E2M5 251 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 MYO1FO00160 1098 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 HLA-DQB2P05538 268 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 PTMAP06454 111 aaKnown RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 ZNF8P17098 575 aaPredicted RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 F8A1P23610 371 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 STAT5AP42229 794 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 ARSEP51690 589 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 GFERP55789 205 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 DPYSL3Q14195 570 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 MAP7Q14244 749 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 QPCTQ16769 361 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 HADHQ16836 314 aaKnown RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 CRTC2Q53ET0 693 aaPredicted RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 LACTB2Q53H82 288 aaPredicted RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 ZNF648Q5T619 568 aaPredicted RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 KCTD6Q8NC69 237 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 MLPHQ9BV36 600 aaPredicted RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 ULBP3Q9BZM4 244 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 CARD9Q9H257 536 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 SCHIP1Q9P0W5 487 aaPredicted RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 PLAAQ9Y263 795 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 PCDHB3Q9Y5E6 796 aa15.42■□□□□ 0.06
SRRT-209ENST00000474896 EPN1Q9Y6I3 576 aaPredicted RBP15.42■□□□□ 0.06
SRRT-209ENST00000474896 LILRA5A6NI73 299 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 NDUFA10O95299 355 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 LCA5LO95447 670 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 C9P02748 559 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 ANKRD34CP0C6C1 535 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 ZNF28P17035 718 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 TYRP1P17643 537 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 XRCC1P18887 633 aaPredicted RBP15.41■□□□□ 0.06
SRRT-209ENST00000474896 DLSTP36957 453 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 SEPHS1P49903 392 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 CLCNKAP51800 687 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 UBE2IP63279 158 aaKnown RBP15.41■□□□□ 0.06
SRRT-209ENST00000474896 C6orf15Q6UXA7 325 aaPredicted RBP15.41■□□□□ 0.06
SRRT-209ENST00000474896 PHYKPLQ8IUZ5 450 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 AVL9Q8NBF6 648 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 FATE1Q969F0 183 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 C9orf72Q96LT7 481 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 SPATA16Q9BXB7 569 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 PACSIN1Q9BY11 444 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 OR2AG1Q9H205 316 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 OSGEPL1Q9H4B0 414 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 SIDT1Q9NXL6 827 aaKnown RBP15.41■□□□□ 0.06
SRRT-209ENST00000474896 OGFRQ9NZT2 677 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 KCTD3Q9Y597 815 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 KCNMB2Q9Y691 235 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 SLC30A1Q9Y6M5 507 aa15.41■□□□□ 0.06
SRRT-209ENST00000474896 CLEC18AA5D8T8 446 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 UBXN7O94888 489 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 SLC25A14O95258 325 aaPredicted RBP15.4■□□□□ 0.06
SRRT-209ENST00000474896 VIPP01282 170 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 JCHAINP01591 159 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 CYP1A2P05177 515 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 MMP2P08253 660 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 H2AFZP0C0S5 128 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 GP1BBP13224 206 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 AMD1P17707 334 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 GJC1P36383 396 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 CD86P42081 329 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 SH3BP2P78314 561 aa15.4■□□□□ 0.06
SRRT-209ENST00000474896 CCZ1BP86790 482 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms