RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 FAM83DQ9H4H8 585 aa13.07□□□□□ -0.32
GAPDH-208ENST00000474249 HAUS4Q9H6D7 363 aa13.07□□□□□ -0.32
GAPDH-208ENST00000474249 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.07□□□□□ -0.32
GAPDH-208ENST00000474249 EPHA6Q9UF33 1036 aa13.07□□□□□ -0.32
GAPDH-208ENST00000474249 AMACRQ9UHK6 382 aa13.07□□□□□ -0.32
GAPDH-208ENST00000474249 DNPEPQ9ULA0 475 aa13.07□□□□□ -0.32
GAPDH-208ENST00000474249 MAP4K5Q9Y4K4 846 aa13.07□□□□□ -0.32
GAPDH-208ENST00000474249 PCDHB3Q9Y5E6 796 aa13.07□□□□□ -0.32
GAPDH-208ENST00000474249 TNRC6AQ8NDV7 1962 aaKnown RBP13.06□□□□□ -0.32
GAPDH-208ENST00000474249 MATN3O15232 486 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 SNX2O60749 519 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 SEMA7AO75326 666 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 SPAG6O75602 509 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 DNAJB5O75953 348 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 KIAA0754O94854 1291 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 SORBS2O94875 1100 aaKnown RBP13.06□□□□□ -0.32
GAPDH-208ENST00000474249 UBXN7O94888 489 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 NDUFA10O95299 355 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 CD48P09326 243 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 MAPK9P45984 424 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 FOXM1Q08050 763 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 PAFAH1B3Q15102 231 aaKnown RBP13.06□□□□□ -0.32
GAPDH-208ENST00000474249 QPCTQ16769 361 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 ABRAXAS1Q6UWZ7 409 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 ZNF547Q8IVP9 402 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 NIPA2Q8N8Q9 360 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 NSMCE1Q8WV22 266 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
GAPDH-208ENST00000474249 RAB33BQ9H082 229 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 STN1Q9H668 368 aaKnown RBP13.06□□□□□ -0.32
GAPDH-208ENST00000474249 SLC40A1Q9NP59 571 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 LHX9Q9NQ69 397 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 KCND3Q9UK17 655 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 PADI1Q9ULC6 663 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 ABCA12Q86UK0 2595 aa13.06□□□□□ -0.32
GAPDH-208ENST00000474249 WIPF3A6NGB9 483 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 LRRC53A6NM62 1247 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 ANKRD66B4E2M5 251 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 GPR89AB7ZAQ6 455 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 GPR89BP0CG08 455 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 TYRP1P17643 537 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 NELFEP18615 380 aaKnown RBP13.05□□□□□ -0.32
GAPDH-208ENST00000474249 CCNCP24863 283 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 SERPINB6P35237 376 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 MMRN1Q13201 1228 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 DNASE1L3Q13609 305 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 ZNF648Q5T619 568 aaPredicted RBP13.05□□□□□ -0.32
GAPDH-208ENST00000474249 WASH2PQ6VEQ5 465 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 ZNF517Q6ZMY9 492 aaPredicted RBP13.05□□□□□ -0.32
GAPDH-208ENST00000474249 ADGRG6Q86SQ4 1221 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 GPR26Q8NDV2 337 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 CT55Q8WUE5 264 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 HSPH1Q92598 858 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 RSC1A1Q92681 617 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 SLC41A2Q96JW4 573 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 TGM7Q96PF1 710 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 RUFY1Q96T51 708 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 ZMYND15Q9H091 742 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 BRD8Q9H0E9 1235 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 PCDH9Q9HC56 1237 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 TRIM39Q9HCM9 518 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 WASH6PQ9NQA3 447 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 KLC4Q9NSK0 619 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 RBM22Q9NW64 420 aaKnown RBP eCLIP13.05□□□□□ -0.323e-9■■□□□ 12.3
GAPDH-208ENST00000474249 RCOR3Q9P2K3 495 aaPredicted RBP13.05□□□□□ -0.32
GAPDH-208ENST00000474249 SCINQ9Y6U3 715 aa13.05□□□□□ -0.32
GAPDH-208ENST00000474249 C1orf232A0A0U1RR37 186 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 CDC14CA4D256 554 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 C21orf140B9A014 251 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 MFSD11O43934 449 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 VPS4BO75351 444 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 HLA-DQB2P05538 268 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 CAPZBP47756 277 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 SEPHS1P49903 392 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 MYL5Q02045 173 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-208ENST00000474249 UGT8Q16880 541 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 ANKRD20A8PQ5CZ79 823 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 FHL5Q5TD97 284 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 NCBP2-AS2Q69YL0 99 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 CLEC17AQ6ZS10 378 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 C11orf96Q7Z7L8 435 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 PHYKPLQ8IUZ5 450 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 CPT1CQ8TCG5 803 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 SSC4DQ8WTU2 575 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 ZNF653Q96CK0 615 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 FCRL4Q96PJ5 515 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 TRIB3Q96RU7 358 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 TWSG1Q9GZX9 223 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 OR2AG1Q9H205 316 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 MRPL47Q9HD33 250 aaKnown RBP13.04□□□□□ -0.32
GAPDH-208ENST00000474249 ARFGAP3Q9NP61 516 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 LMBRD1Q9NUN5 540 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 CUEDC1Q9NWM3 386 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-208ENST00000474249 NFKBIL1Q9UBC1 381 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-208ENST00000474249 TMPRSS11EQ9UL52 423 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 VPS4AQ9UN37 437 aa13.04□□□□□ -0.32
GAPDH-208ENST00000474249 PCDHGA9Q9Y5G4 932 aaKnown RBP13.04□□□□□ -0.32
GAPDH-208ENST00000474249 PIPSLA2A3N6 862 aa13.03□□□□□ -0.32
GAPDH-208ENST00000474249 TTLL8A6PVC2 850 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms