RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ARFGAP3Q9NP61 516 aa15.11■□□□□ 0.01
VTI1A-203ENST00000472892 HELZ2Q9BYK8 2649 aaKnown RBP15.1■□□□□ 0.01
VTI1A-203ENST00000472892 LOC285095A0A1B0GVY8 99 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 STMND1H3BQB6 276 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 AURKAO14965 403 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 DUX1O43812 170 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 SNX2O60749 519 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 PMPCBO75439 489 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 EPOP01588 193 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 ITGB2P05107 769 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 PLA2G2AP14555 144 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 PECAM1P16284 738 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-203ENST00000472892 BPIP17213 487 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 EPHA4P54764 986 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 NFATC2Q13469 925 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 LINC00303Q3SY05 128 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 SARM1Q6SZW1 724 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 XKR5Q6UX68 686 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 ARHGAP22Q7Z5H3 698 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 VASH2Q86V25 355 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 PHYKPLQ8IUZ5 450 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 RCOR2Q8IZ40 523 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 BMPERQ8N8U9 685 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 TC2NQ8N9U0 490 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 CCDC112Q8NEF3 446 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 NKD1Q969G9 470 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 PMEPA1Q969W9 287 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-203ENST00000472892 ASPSCR1Q9BZE9 553 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 STN1Q9H668 368 aaKnown RBP15.1■□□□□ 0.01
VTI1A-203ENST00000472892 PRDM8Q9NQV8 689 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 KLC4Q9NSK0 619 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 OCIAD1Q9NX40 245 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 UBP1Q9NZI7 540 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 CPNE7Q9UBL6 633 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 SPO11Q9Y5K1 396 aa15.1■□□□□ 0.01
VTI1A-203ENST00000472892 PRR19A6NJB7 356 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 MTSS1O43312 755 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 ZRANB2O95218 330 aaKnown RBP eCLIP15.09■□□□□ 0.01
VTI1A-203ENST00000472892 XRCC1P18887 633 aaPredicted RBP15.09■□□□□ 0.01
VTI1A-203ENST00000472892 WT1P19544 449 aaPredicted RBP15.09■□□□□ 0.01
VTI1A-203ENST00000472892 HMGCLP35914 325 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 UBE2IP63279 158 aaKnown RBP15.09■□□□□ 0.01
VTI1A-203ENST00000472892 LLGL1Q15334 1064 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 TFDP3Q5H9I0 405 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 KDELC1Q6UW63 502 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 KATNAL2Q8IYT4 538 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 AVL9Q8NBF6 648 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 DTX3LQ8TDB6 740 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 NCSTNQ92542 709 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 P3H4Q92791 437 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 ART4Q93070 314 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 PLEKHG4BQ96PX9 1271 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 VPS35Q96QK1 796 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 VAT1Q99536 393 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 GOLPH3Q9H4A6 298 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 EPB41L1Q9H4G0 881 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 UCK1Q9HA47 277 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 SLC39A1Q9NY26 324 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 SLC23A2Q9UGH3 650 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 FAM153AQ9UHL3 310 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 TMPRSS11EQ9UL52 423 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 PCDHGA4Q9Y5G9 962 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 PCDHA13Q9Y5I0 950 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 B3GALT1Q9Y5Z6 326 aa15.09■□□□□ 0.01
VTI1A-203ENST00000472892 ZFC3H1O60293 1989 aaKnown RBP15.08■□□□□ 0
VTI1A-203ENST00000472892 hCG_1818297A0A087WSY0 165 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 EFCAB7A8K855 629 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 B8ZZF3 427 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 KMOO15229 486 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 VEGFDO43915 354 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 SLC4A1P02730 911 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 ZNF7P17097 686 aaPredicted RBP15.08■□□□□ 0
VTI1A-203ENST00000472892 UGT1A3P35503 534 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 WNT3AP56704 352 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 RAB15P59190 212 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 MC2RQ01718 297 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 DCAF12Q5T6F0 453 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 KAZNQ674X7 775 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 ZNF547Q8IVP9 402 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 CCDC170Q8IYT3 715 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 EXD3Q8N9H8 876 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 ZSCAN1Q8NBB4 408 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 FCRL5Q96RD9 977 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 SPRY4Q9C004 299 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 TRABDQ9H4I3 376 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 SCHIP1Q9P0W5 487 aaPredicted RBP15.08■□□□□ 0
VTI1A-203ENST00000472892 ZNF462Q96JM2 2506 aa15.08■□□□□ 0
VTI1A-203ENST00000472892 A8MU76 341 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 CDK14O94921 469 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 NFKB1P19838 968 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 PPM1FP49593 454 aaPredicted RBP15.07■□□□□ 0
VTI1A-203ENST00000472892 ATP1A2P50993 1020 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 ATP13A5Q4VNC0 1218 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 KHDC1Q4VXA5 237 aaKnown RBP15.07■□□□□ 0
VTI1A-203ENST00000472892 SIRPB2Q5JXA9 342 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 SNAP47Q5SQN1 464 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 ANKS6Q68DC2 871 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 CRTC3Q6UUV7 619 aa15.07■□□□□ 0
VTI1A-203ENST00000472892 ABRAXAS1Q6UWZ7 409 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms