RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ACVR2AP27037 513 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 CCR2P41597 374 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 RGS7P49802 495 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 CLCN5P51795 746 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 GPC5P78333 572 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 SLC7A9P82251 487 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 SATB1Q01826 763 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 ARHGEF7Q14155 803 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 SLC29A2Q14542 456 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 INSCQ1MX18 579 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 FBXO43Q4G163 708 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 TDRD12Q587J7 1177 aaKnown RBP6.41□□□□□ -1.38
PTCD3-208ENST00000469585 ARHGAP40Q5TG30 622 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 SFMBT2Q5VUG0 894 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 NUGGCQ68CJ6 796 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 OR6B2Q6IFH4 312 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 VITQ6UXI7 678 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 TRMT11Q7Z4G4 463 aaKnown RBP6.41□□□□□ -1.38
PTCD3-208ENST00000469585 C1orf131Q8NDD1 294 aaKnown RBP6.41□□□□□ -1.38
PTCD3-208ENST00000469585 SCAMP5Q8TAC9 235 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 OSCP1Q8WVF1 389 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 UCMAQ8WVF2 138 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 IPCEF1Q8WWN9 437 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF606Q8WXB4 792 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 FAM3CQ92520 227 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 SHC3Q92529 594 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 SECISBP2LQ93073 1101 aaKnown RBP6.41□□□□□ -1.38
PTCD3-208ENST00000469585 FAM136AQ96C01 138 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 PPP1R13BQ96KQ4 1090 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 SERPINB11Q96P15 392 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 TWNKQ96RR1 684 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 TBC1D17Q9HA65 648 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 TRPV5Q9NQA5 729 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 GKN1Q9NS71 199 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 RRN3Q9NYV6 651 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 WDR35Q9P2L0 1181 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 MYO6Q9UM54 1294 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 CAPN11Q9UMQ6 739 aa6.41□□□□□ -1.38
PTCD3-208ENST00000469585 BZW2Q9Y6E2 419 aaKnown RBP6.41□□□□□ -1.38
PTCD3-208ENST00000469585 F8VZ95 297 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 RAB27BO00194 218 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 COCHO43405 550 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 HSF2BPO75031 334 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 GFPT2O94808 682 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 IPO7O95373 1038 aaKnown RBP6.4□□□□□ -1.38
PTCD3-208ENST00000469585 VNN2O95498 520 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 APODP05090 189 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 CALB1P05937 261 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 MAKP20794 623 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 TNFAIP3P21580 790 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 GAD2Q05329 585 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 BTKQ06187 659 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 FCHO2Q0JRZ9 810 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 RUNX3Q13761 415 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 E2F2Q14209 437 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 ASIC2Q16515 512 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 ZXDCQ2QGD7 858 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-208ENST00000469585 ARL13BQ3SXY8 428 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 STXBP5Q5T5C0 1151 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 TAF3Q5VWG9 929 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 SNX30Q5VWJ9 437 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 ICE2Q659A1 982 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 RGS7BPQ6MZT1 257 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-208ENST00000469585 VWA1Q6PCB0 445 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 KCTD20Q7Z5Y7 419 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 LUZP1Q86V48 1076 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 SCML4Q8N228 414 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 ACRBPQ8NEB7 543 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 LMO3Q8TAP4 145 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 USP13Q92995 863 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-208ENST00000469585 ERGIC2Q96RQ1 377 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 ULBP1Q9BZM6 244 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 EDEM3Q9BZQ6 932 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 TRIM5Q9C035 493 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 LHX5Q9H2C1 402 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 EPHX3Q9H6B9 360 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 POPDC2Q9HBU9 364 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 HEBP1Q9NRV9 189 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 TBC1D23Q9NUY8 699 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 DKK4Q9UBT3 224 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 RAB23Q9ULC3 237 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 NDRG2Q9UN36 371 aaKnown RBP6.4□□□□□ -1.38
PTCD3-208ENST00000469585 HBS1LQ9Y450 684 aaKnown RBP6.4□□□□□ -1.38
PTCD3-208ENST00000469585 COMMD10Q9Y6G5 202 aa6.4□□□□□ -1.38
PTCD3-208ENST00000469585 DENND4AQ7Z401 1863 aa6.4□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF638Q14966 1978 aaKnown RBP6.4□□□□□ -1.39
PTCD3-208ENST00000469585 CDH23Q9H251 3354 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 SPECC1L-ADORA2AF8WAN1 911 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 RRP9O43818 475 aaKnown RBP6.39□□□□□ -1.39
PTCD3-208ENST00000469585 MOCS3O95396 460 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 LATS1O95835 1130 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 F9P00740 461 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 OAS1P00973 400 aaKnown RBP6.39□□□□□ -1.39
PTCD3-208ENST00000469585 HMBSP08397 361 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 CYP11B1P15538 503 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 DRD1P21728 446 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 PTDSS1P48651 473 aaKnown RBP6.39□□□□□ -1.39
PTCD3-208ENST00000469585 CCR3P51677 355 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 YWHAZP63104 245 aaKnown RBP6.39□□□□□ -1.39
PTCD3-208ENST00000469585 KLHL30Q0D2K2 578 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms