RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SLC4A1P02730 911 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 GYPCP04921 128 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 NOP2P46087 812 aaKnown RBP17.04■□□□□ 0.32
TRIM56-203ENST00000467847 IFI35P80217 286 aaPredicted RBP17.04■□□□□ 0.32
TRIM56-203ENST00000467847 PPIDQ08752 370 aaKnown RBP17.04■□□□□ 0.32
TRIM56-203ENST00000467847 ABHD18Q0P651 414 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 CDC20Q12834 499 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 CRTC3Q6UUV7 619 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 CNTD1Q8N815 330 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 RAPGEF5Q92565 580 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 EID2BQ96D98 161 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 RNF157Q96PX1 679 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 ZSCAN5AQ9BUG6 496 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 TRIT1Q9H3H1 467 aaKnown RBP17.04■□□□□ 0.32
TRIM56-203ENST00000467847 TRIM39Q9HCM9 518 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 NENFQ9UMX5 172 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 SHOC2Q9UQ13 582 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 TMEM184BQ9Y519 407 aaPredicted RBP17.04■□□□□ 0.32
TRIM56-203ENST00000467847 HEY1Q9Y5J3 304 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 ADGRG1Q9Y653 693 aa17.04■□□□□ 0.32
TRIM56-203ENST00000467847 DOPEY2Q9Y3R5 2298 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 GPR89AB7ZAQ6 455 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 H2AFZP0C0S5 128 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 ANKRD34CP0C6C1 535 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 PIRTP0C851 137 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 GPR89BP0CG08 455 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 GP1BBP13224 206 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 KDELR1P24390 212 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 CLCNKAP51800 687 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 UBE2IP63279 158 aaKnown RBP17.03■□□□□ 0.32
TRIM56-203ENST00000467847 AP1B1Q10567 949 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 INSCQ1MX18 579 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 PLA2G4EQ3MJ16 856 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 H2AFVQ71UI9 128 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 TRIM48Q8IWZ4 208 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 GPR26Q8NDV2 337 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 PLEKHG4BQ96PX9 1271 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 PACSIN1Q9BY11 444 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 CEP41Q9BYV8 373 aa17.03■□□□□ 0.32
TRIM56-203ENST00000467847 LRRD1A4D1F6 860 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 DLGAP3O95886 979 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 VIPP01282 170 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 XRCC1P18887 633 aaPredicted RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 GFERP55789 205 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 DCDC1P59894 354 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 MC1RQ01726 317 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 FOXM1Q08050 763 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 UBAP2LQ14157 1087 aaKnown RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 SEPT7Q16181 437 aaKnown RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 SKIDA1Q1XH10 827 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 FAM182AQ5T1J6 154 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 ADGRG6Q86SQ4 1221 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 TRAM1L1Q8N609 369 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 ESX1Q8N693 406 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 PLD5Q8N7P1 536 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 C9orf43Q8TAL5 461 aaPredicted RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 STARD8Q92502 1023 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 GLYATL1Q969I3 302 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 IMP4Q96G21 291 aaKnown RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 C9orf72Q96LT7 481 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 TRIB3Q96RU7 358 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 GPR63Q9BZJ6 419 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 ULBP3Q9BZM4 244 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 UCK1Q9HA47 277 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 MAGEE1Q9HCI5 957 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 ZNF71Q9NQZ8 489 aaPredicted RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 RAD18Q9NS91 495 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 SIDT1Q9NXL6 827 aaKnown RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 OGFRQ9NZT2 677 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 SCHIP1Q9P0W5 487 aaPredicted RBP17.02■□□□□ 0.32
TRIM56-203ENST00000467847 ZNF711Q9Y462 761 aa17.02■□□□□ 0.32
TRIM56-203ENST00000467847 LRRK2Q5S007 2527 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 SYCE3A1L190 88 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 CHUKO15111 745 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 UBXN7O94888 489 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 C9P02748 559 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 TYRP1P17643 537 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 OAS2P29728 719 aaKnown RBP17.01■□□□□ 0.31
TRIM56-203ENST00000467847 CASP14P31944 242 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 STAT5AP42229 794 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 MESDQ14696 234 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 PCSK7Q16549 785 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 SLC18A3Q16572 532 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 DEFB109BQ30KR1 87 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 PDPK2PQ6A1A2 396 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 C16orf46Q6P387 395 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 TMEM26Q6ZUK4 368 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 TMC3Q7Z5M5 1100 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 NT5DC3Q86UY8 548 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 LRRTM4Q86VH4 590 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 APOBEC4Q8WW27 367 aaKnown RBP17.01■□□□□ 0.31
TRIM56-203ENST00000467847 AGAP3Q96P47 875 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 TGM7Q96PF1 710 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 EPN3Q9H201 632 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 NFKBIL1Q9UBC1 381 aaPredicted RBP17.01■□□□□ 0.31
TRIM56-203ENST00000467847 SLC23A2Q9UGH3 650 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 DNAJC16Q9Y2G8 782 aa17.01■□□□□ 0.31
TRIM56-203ENST00000467847 RPS6KL1Q9Y6S9 549 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms