RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 INO80DQ53TQ3 878 aaPredicted RBP9.28□□□□□ -0.92
APP-213ENST00000464867 DOK6Q6PKX4 331 aa9.28□□□□□ -0.92
APP-213ENST00000464867 LIPIQ6XZB0 460 aa9.28□□□□□ -0.92
APP-213ENST00000464867 C11orf57Q6ZUT1 292 aaPredicted RBP9.28□□□□□ -0.92
APP-213ENST00000464867 DNAAF5Q86Y56 855 aa9.28□□□□□ -0.92
APP-213ENST00000464867 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
APP-213ENST00000464867 LZTR1Q8N653 840 aa9.28□□□□□ -0.92
APP-213ENST00000464867 CLEC1AQ8NC01 280 aa9.28□□□□□ -0.92
APP-213ENST00000464867 GRHL3Q8TE85 626 aa9.28□□□□□ -0.92
APP-213ENST00000464867 FAR1Q8WVX9 515 aa9.28□□□□□ -0.92
APP-213ENST00000464867 VOPP1Q96AW1 172 aa9.28□□□□□ -0.92
APP-213ENST00000464867 NSUN5Q96P11 429 aaKnown RBP9.28□□□□□ -0.92
APP-213ENST00000464867 AGAP3Q96P47 875 aa9.28□□□□□ -0.92
APP-213ENST00000464867 TGM7Q96PF1 710 aa9.28□□□□□ -0.92
APP-213ENST00000464867 TRAPPC9Q96Q05 1148 aa9.28□□□□□ -0.92
APP-213ENST00000464867 SSBP4Q9BWG4 385 aaPredicted RBP9.28□□□□□ -0.92
APP-213ENST00000464867 RETREG1Q9H6L5 497 aa9.28□□□□□ -0.92
APP-213ENST00000464867 PPARGC1AQ9UBK2 798 aaKnown RBP9.28□□□□□ -0.92
APP-213ENST00000464867 DNAI1Q9UI46 699 aa9.28□□□□□ -0.92
APP-213ENST00000464867 SLC17A4Q9Y2C5 497 aa9.28□□□□□ -0.92
APP-213ENST00000464867 PLEKHM1Q9Y4G2 1056 aa9.28□□□□□ -0.92
APP-213ENST00000464867 ST14Q9Y5Y6 855 aa9.28□□□□□ -0.92
APP-213ENST00000464867 CSPG4Q6UVK1 2322 aa9.28□□□□□ -0.92
APP-213ENST00000464867 CNTRLQ7Z7A1 2325 aa9.27□□□□□ -0.92
APP-213ENST00000464867 A0A1W2PQJ5 194 aa9.27□□□□□ -0.93
APP-213ENST00000464867 FANCGO15287 622 aa9.27□□□□□ -0.93
APP-213ENST00000464867 KDELR3O43731 214 aa9.27□□□□□ -0.93
APP-213ENST00000464867 KLRC4O43908 158 aa9.27□□□□□ -0.93
APP-213ENST00000464867 CUTAO60888 179 aa9.27□□□□□ -0.93
APP-213ENST00000464867 RAMP2O60895 175 aa9.27□□□□□ -0.93
APP-213ENST00000464867 DAB1O75553 588 aa9.27□□□□□ -0.93
APP-213ENST00000464867 LETM1O95202 739 aaPredicted RBP9.27□□□□□ -0.93
APP-213ENST00000464867 C9P02748 559 aa9.27□□□□□ -0.93
APP-213ENST00000464867 C8BP07358 591 aa9.27□□□□□ -0.93
APP-213ENST00000464867 KRT5P13647 590 aa9.27□□□□□ -0.93
APP-213ENST00000464867 POLD2P49005 469 aa9.27□□□□□ -0.93
APP-213ENST00000464867 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
APP-213ENST00000464867 SULT1E1P49888 294 aa9.27□□□□□ -0.93
APP-213ENST00000464867 GFERP55789 205 aa9.27□□□□□ -0.93
APP-213ENST00000464867 CDK3Q00526 305 aa9.27□□□□□ -0.93
APP-213ENST00000464867 CETN1Q12798 172 aa9.27□□□□□ -0.93
APP-213ENST00000464867 IZUMO3Q5VZ72 239 aa9.27□□□□□ -0.93
APP-213ENST00000464867 FCRL6Q6DN72 434 aa9.27□□□□□ -0.93
APP-213ENST00000464867 PWWP2BQ6NUJ5 590 aa9.27□□□□□ -0.93
APP-213ENST00000464867 RWDD4Q6NW29 188 aaKnown RBP9.27□□□□□ -0.93
APP-213ENST00000464867 XKRXQ6PP77 449 aa9.27□□□□□ -0.93
APP-213ENST00000464867 Q6ZS92 163 aa9.27□□□□□ -0.93
APP-213ENST00000464867 CUZD1Q86UP6 607 aa9.27□□□□□ -0.93
APP-213ENST00000464867 GALNT13Q8IUC8 556 aa9.27□□□□□ -0.93
APP-213ENST00000464867 TGIF2LYQ8IUE0 185 aa9.27□□□□□ -0.93
APP-213ENST00000464867 CBARPQ8N350 705 aaPredicted RBP9.27□□□□□ -0.93
APP-213ENST00000464867 ADAMTS17Q8TE56 1095 aa9.27□□□□□ -0.93
APP-213ENST00000464867 COG1Q8WTW3 980 aa9.27□□□□□ -0.93
APP-213ENST00000464867 NUS1Q96E22 293 aa9.27□□□□□ -0.93
APP-213ENST00000464867 FER1L6-AS2Q96M78 137 aa9.27□□□□□ -0.93
APP-213ENST00000464867 SYNCQ9H7C4 482 aa9.27□□□□□ -0.93
APP-213ENST00000464867 WASH6PQ9NQA3 447 aa9.27□□□□□ -0.93
APP-213ENST00000464867 ANLNQ9NQW6 1124 aa9.27□□□□□ -0.93
APP-213ENST00000464867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.27□□□□□ -0.93
APP-213ENST00000464867 ZNF212Q9UDV6 495 aa9.27□□□□□ -0.93
APP-213ENST00000464867 ABCA4P78363 2273 aa9.27□□□□□ -0.93
APP-213ENST00000464867 COL6A5A8TX70 2615 aa9.26□□□□□ -0.93
APP-213ENST00000464867 KIR2DS5A0A0G2JLQ3 304 aa9.26□□□□□ -0.93
APP-213ENST00000464867 A0A0G2JNG1 304 aa9.26□□□□□ -0.93
APP-213ENST00000464867 OR5K4A6NMS3 321 aa9.26□□□□□ -0.93
APP-213ENST00000464867 A8MX80 341 aa9.26□□□□□ -0.93
APP-213ENST00000464867 KIR2DS3K7RE56 304 aa9.26□□□□□ -0.93
APP-213ENST00000464867 CCL21O00585 134 aa9.26□□□□□ -0.93
APP-213ENST00000464867 E2F3O00716 465 aa9.26□□□□□ -0.93
APP-213ENST00000464867 INSIG1O15503 277 aa9.26□□□□□ -0.93
APP-213ENST00000464867 CPNE3O75131 537 aaKnown RBP9.26□□□□□ -0.93
APP-213ENST00000464867 JRKO75564 520 aa9.26□□□□□ -0.93
APP-213ENST00000464867 IGHEP01854 428 aa9.26□□□□□ -0.93
APP-213ENST00000464867 KLK2P20151 261 aa9.26□□□□□ -0.93
APP-213ENST00000464867 SERPINA4P29622 427 aa9.26□□□□□ -0.93
APP-213ENST00000464867 CDC16Q13042 620 aa9.26□□□□□ -0.93
APP-213ENST00000464867 TUBB3Q13509 450 aa9.26□□□□□ -0.93
APP-213ENST00000464867 MYBPC3Q14896 1274 aa9.26□□□□□ -0.93
APP-213ENST00000464867 KIR2DS5Q14953 304 aa9.26□□□□□ -0.93
APP-213ENST00000464867 ANO6Q4KMQ2 910 aa9.26□□□□□ -0.93
APP-213ENST00000464867 CACHD1Q5VU97 1274 aa9.26□□□□□ -0.93
APP-213ENST00000464867 AFMIDQ63HM1 303 aa9.26□□□□□ -0.93
APP-213ENST00000464867 RAET1GQ6H3X3 334 aa9.26□□□□□ -0.93
APP-213ENST00000464867 IYDQ6PHW0 289 aa9.26□□□□□ -0.93
APP-213ENST00000464867 SHC4Q6S5L8 630 aa9.26□□□□□ -0.93
APP-213ENST00000464867 FAM180AQ6UWF9 173 aa9.26□□□□□ -0.93
APP-213ENST00000464867 DPPA4Q7L190 304 aa9.26□□□□□ -0.93
APP-213ENST00000464867 RAB43Q86YS6 212 aa9.26□□□□□ -0.93
APP-213ENST00000464867 GRAMD1CQ8IYS0 662 aa9.26□□□□□ -0.93
APP-213ENST00000464867 INPP5DQ92835 1189 aa9.26□□□□□ -0.93
APP-213ENST00000464867 ZDHHC12Q96GR4 267 aa9.26□□□□□ -0.93
APP-213ENST00000464867 INTS4Q96HW7 963 aaKnown RBP9.26□□□□□ -0.93
APP-213ENST00000464867 EXOC2Q96KP1 924 aa9.26□□□□□ -0.93
APP-213ENST00000464867 IP6K3Q96PC2 410 aa9.26□□□□□ -0.93
APP-213ENST00000464867 TUBGCP5Q96RT8 1024 aa9.26□□□□□ -0.93
APP-213ENST00000464867 NPY6RQ99463 290 aa9.26□□□□□ -0.93
APP-213ENST00000464867 HERPUD2Q9BSE4 406 aa9.26□□□□□ -0.93
APP-213ENST00000464867 TBC1D10AQ9BXI6 508 aa9.26□□□□□ -0.93
APP-213ENST00000464867 ATP13A3Q9H7F0 1226 aa9.26□□□□□ -0.93
APP-213ENST00000464867 AKIRIN1Q9H9L7 192 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms