RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 MC4RP32245 332 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 ARSDP51689 593 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 SESN2P58004 480 aaPredicted RBP15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 ACVR1Q04771 509 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 ILF3Q12906 894 aaKnown RBP eCLIP15.22■□□□□ 0.036e-8■■■■■ 27.3
RAB11FIP3-208ENST00000464263 PTK6Q13882 451 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 LRP8Q14114 963 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 PPP1R7Q15435 360 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 PCID2Q5JVF3 399 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 GPRC6AQ5T6X5 926 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 CHST15Q7LFX5 561 aaPredicted RBP15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 SNX20Q7Z614 316 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 CAND1Q86VP6 1230 aaKnown RBP15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 ZNF547Q8IVP9 402 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 NAT8LQ8N9F0 302 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 GPR156Q8NFN8 814 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 OR13J1Q8NGT2 312 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 ADAMTS14Q8WXS8 1223 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 C16orf45Q96MC5 204 aaPredicted RBP15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 FAM96AQ9H5X1 160 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 NCKIPSDQ9NZQ3 722 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 TAAR2Q9P1P5 351 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 WASF3Q9UPY6 502 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 TCAF1Q9Y4C2 921 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 RP1P56715 2156 aa15.22■□□□□ 0.03
RAB11FIP3-208ENST00000464263 CACNA1AO00555 2505 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 TRBV5-4A0A0C4DH59 114 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 EME2A4GXA9 379 aaPredicted RBP15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 NOBOXO60393 691 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 AVILO75366 819 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 TMEM63AO94886 807 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 TRIM16O95361 564 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 IVDP26440 423 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 MGAT1P26572 445 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 CDKN1CP49918 316 aaPredicted RBP15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 DUSP3P51452 185 aaPredicted RBP15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 CRADDP78560 199 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 SARNPP82979 210 aaKnown RBP15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 DAB2P98082 770 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 ILKQ13418 452 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 NR0B2Q15466 257 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 GPR33Q49SQ1 333 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 NLRP9Q7RTR0 991 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 RAB44Q7Z6P3 723 aaPredicted RBP15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 C17orf82Q86X59 251 aaPredicted RBP15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 SFTPA2Q8IWL1 248 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 RASGEF1AQ8N9B8 481 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 MCUQ8NE86 351 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 GDAP1Q8TB36 358 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 PEX13Q92968 403 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 GLMNQ92990 594 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 TRIM44Q96DX7 344 aaPredicted RBP15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 RUNDC3BQ96NL0 473 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 IL22Q9GZX6 179 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 DPEP2Q9H4A9 486 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 CHRAC1Q9NRG0 131 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 BFARQ9NZS9 450 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 SIRPGQ9P1W8 387 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 GULP1Q9UBP9 304 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 SLC23A2Q9UGH3 650 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 SLC2A6Q9UGQ3 507 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 PADI4Q9UM07 663 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 SLC30A1Q9Y6M5 507 aa15.21■□□□□ 0.03
RAB11FIP3-208ENST00000464263 PIKFYVEQ9Y2I7 2098 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 CCDC162PA2VCL2 907 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 KMOO15229 486 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 RFPL3O75679 317 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 TOP3BO95985 862 aaKnown RBP15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 MLNP12872 115 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 ITGALP20701 1170 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 PMLP29590 882 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 ACTR1BP42025 376 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 RPIAP49247 311 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 CLCNKAP51800 687 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 ACTR1AP61163 376 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 B4GALNT1Q00973 533 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 DR1Q01658 176 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 RNASEH2BQ5TBB1 312 aaKnown RBP15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 GUSBP11Q6P575 273 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 SLC30A9Q6PML9 568 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 SYDE1Q6ZW31 735 aaPredicted RBP15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 C11orf96Q7Z7L8 435 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 LRRTM4Q86VH4 590 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 NXPE1Q8N323 547 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 CHCHD4Q8N4Q1 142 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 ARL10Q8N8L6 244 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 KYQ8NBH2 561 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 SPATA4Q8NEY3 305 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 PPHLN1Q8NEY8 458 aaKnown RBP15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 HDAC10Q969S8 669 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 ULK4Q96C45 1275 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 TTC25Q96NG3 672 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 SPTBN2O15020 2390 aa15.2■□□□□ 0.02
RAB11FIP3-208ENST00000464263 CPED1A4D0V7 1026 aa15.19■□□□□ 0.02
RAB11FIP3-208ENST00000464263 OR51F1A6NGY5 319 aa15.19■□□□□ 0.02
RAB11FIP3-208ENST00000464263 PRR19A6NJB7 356 aa15.19■□□□□ 0.02
RAB11FIP3-208ENST00000464263 DNALI1O14645 258 aaPredicted RBP15.19■□□□□ 0.02
RAB11FIP3-208ENST00000464263 SGTAO43765 313 aa15.19■□□□□ 0.02
RAB11FIP3-208ENST00000464263 GP1BAP07359 652 aa15.19■□□□□ 0.02
RAB11FIP3-208ENST00000464263 PRSS56P0CW18 603 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms