RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ZNF567Q8N184 647 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 OR10G6Q8NH81 332 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 WBP1Q96G27 269 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 OXNAD1Q96HP4 312 aaPredicted RBP18.72■□□□□ 0.59
VARS-220ENST00000461874 FCRL5Q96RD9 977 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 HEMGNQ9BXL5 484 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 RBSNQ9H1K0 784 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 TRABDQ9H4I3 376 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 TMEM9Q9P0T7 183 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 SCN8AQ9UQD0 1980 aa18.72■□□□□ 0.59
VARS-220ENST00000461874 F3P13726 295 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 MPSTP25325 297 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 HMGCLP35914 325 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 XRCC4Q13426 336 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 NOMO1Q15155 1222 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 SIRPB2Q5JXA9 342 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 TMEM164Q5U3C3 297 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 SLC9B2Q86UD5 537 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 ZFAND4Q86XD8 727 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 PHYKPLQ8IUZ5 450 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 SH3KBP1Q96B97 665 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 AHCYL2Q96HN2 611 aaKnown RBP18.71■□□□□ 0.59
VARS-220ENST00000461874 CALR3Q96L12 384 aaKnown RBP18.71■□□□□ 0.59
VARS-220ENST00000461874 MRGPRX2Q96LB1 330 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 PLEKHG4BQ96PX9 1271 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 STN1Q9H668 368 aaKnown RBP18.71■□□□□ 0.59
VARS-220ENST00000461874 BPIFA1Q9NP55 256 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 PRDM8Q9NQV8 689 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 KLC4Q9NSK0 619 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 PDP2Q9P2J9 529 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 TRHDEQ9UKU6 1024 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 TMPRSS11EQ9UL52 423 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 PCDHA3Q9Y5H8 950 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 ATMQ13315 3056 aa18.71■□□□□ 0.59
VARS-220ENST00000461874 KIR2DS5A0A0G2JLQ3 304 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 A0A0G2JNG1 304 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 OR5K4A6NMS3 321 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 F5H423 210 aaPredicted RBP18.7■□□□□ 0.58
VARS-220ENST00000461874 APOC4-APOC2K7ER74 178 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 KIR2DS3K7RE56 304 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 DUX1O43812 170 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 C1QL1O75973 258 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 APOC2P02655 101 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 FGF3P11487 239 aaPredicted RBP18.7■□□□□ 0.58
VARS-220ENST00000461874 CD82P27701 267 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 CTNNA1P35221 906 aaKnown RBP18.7■□□□□ 0.58
VARS-220ENST00000461874 CHRNA4P43681 627 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 COPS2P61201 443 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 NFATC2Q13469 925 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 KIR2DS5Q14953 304 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 TAF1BQ53T94 588 aaPredicted RBP18.7■□□□□ 0.58
VARS-220ENST00000461874 CRTC3Q6UUV7 619 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 DTX1Q86Y01 620 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 TTC30BQ8N4P2 665 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 SLC25A41Q8N5S1 370 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 AGBL5Q8NDL9 886 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 TTC9Q92623 222 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 VPS35Q96QK1 796 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 WDR70Q9NW82 654 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 CPNE7Q9UBL6 633 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 SLC23A2Q9UGH3 650 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 DUSP10Q9Y6W6 482 aa18.7■□□□□ 0.58
VARS-220ENST00000461874 KMOO15229 486 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 VEGFDO43915 354 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 MTX2O75431 263 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 CSTF2P33240 577 aaKnown RBP eCLIP18.69■□□□□ 0.58
VARS-220ENST00000461874 TNNT3P45378 269 aaPredicted RBP18.69■□□□□ 0.58
VARS-220ENST00000461874 C19orf57Q0VDD7 668 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 MPP3Q13368 585 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 SLC1A5Q15758 541 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 ATP13A5Q4VNC0 1218 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 KHDC1Q4VXA5 237 aaKnown RBP18.69■□□□□ 0.58
VARS-220ENST00000461874 WDR74Q6RFH5 385 aaPredicted RBP18.69■□□□□ 0.58
VARS-220ENST00000461874 LRRTM4Q86VH4 590 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 AVL9Q8NBF6 648 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 IPMKQ8NFU5 416 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 DTX3LQ8TDB6 740 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 TAAR9Q96RI9 348 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 C10orf88Q9H8K7 445 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 IL26Q9NPH9 171 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 HACD3Q9P035 362 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 EFR3BQ9Y2G0 817 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 REXO2Q9Y3B8 237 aaKnown RBP18.69■□□□□ 0.58
VARS-220ENST00000461874 PCDHGA3Q9Y5H0 932 aa18.69■□□□□ 0.58
VARS-220ENST00000461874 ZFC3H1O60293 1989 aaKnown RBP18.69■□□□□ 0.58
VARS-220ENST00000461874 PRR19A6NJB7 356 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 BTNL10A8MVZ5 291 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.68■□□□□ 0.58
VARS-220ENST00000461874 H7C0C1 242 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 CDK14O94921 469 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 IPO7O95373 1038 aaKnown RBP18.68■□□□□ 0.58
VARS-220ENST00000461874 ZNF7P17097 686 aaPredicted RBP18.68■□□□□ 0.58
VARS-220ENST00000461874 HLA-DPA1P20036 260 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 RBL1P28749 1068 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 ATP5OP48047 213 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 PPM1FP49593 454 aaPredicted RBP18.68■□□□□ 0.58
VARS-220ENST00000461874 EPHA4P54764 986 aa18.68■□□□□ 0.58
VARS-220ENST00000461874 UBE2IP63279 158 aaKnown RBP18.68■□□□□ 0.58
VARS-220ENST00000461874 SRSF6Q13247 344 aaKnown RBP18.68■□□□□ 0.58
VARS-220ENST00000461874 CCDC181Q5TID7 509 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms