RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 PAPD4Q6PIY7 484 aaKnown RBP3.78□□□□□ -1.8
CLK1-206ENST00000461326 B3GNT6Q6ZMB0 384 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 IRF2BP2Q7Z5L9 587 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 CCDC190Q86UF4 302 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 OR14A16Q8NHC5 309 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 FAM216AQ8WUB2 273 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 APBB2Q92870 758 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 ARSGQ96EG1 525 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 PGAP3Q96FM1 320 aaPredicted RBP3.78□□□□□ -1.8
CLK1-206ENST00000461326 CFAP57Q96MR6 1250 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 ABHD1Q96SE0 405 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 KLHL4Q9C0H6 718 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 FAM234AQ9H0X4 552 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 DNAJC18Q9H819 358 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 PCDH9Q9HC56 1237 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 CCDC177Q9NQR7 707 aaPredicted RBP3.78□□□□□ -1.8
CLK1-206ENST00000461326 PAG1Q9NWQ8 432 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 MCM9Q9NXL9 1143 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 SLC9A2Q9UBY0 812 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 TRPV2Q9Y5S1 764 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 CACNA1IQ9P0X4 2223 aa3.78□□□□□ -1.8
CLK1-206ENST00000461326 ARHGEF40Q8TER5 1519 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 TRBC2A0A5B9 178 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 TMEM8BA6NDV4 472 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 A8MXE2 369 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 MAGEB17A8MXT2 336 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 J3KR12 359 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 ADAMDEC1O15204 470 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 KCNN4O15554 427 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 PLRG1O43660 514 aaKnown RBP3.77□□□□□ -1.81
CLK1-206ENST00000461326 NDUFS7O75251 213 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 RFPL2O75678 378 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 GJA1P17302 382 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 NR2F2P24468 414 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 MT3P25713 68 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 CDC25AP30304 524 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 THBS3P49746 956 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 Q0VFX4 171 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 HYAL1Q12794 435 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 GAGE2BQ13066 116 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 ALCAMQ13740 583 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 KRT33BQ14525 404 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 CRY2Q49AN0 593 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 GAGE2EQ4V326 116 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 TDRD12Q587J7 1177 aaKnown RBP3.77□□□□□ -1.81
CLK1-206ENST00000461326 GAGE2AQ6NT46 116 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 DUS1LQ6P1R4 473 aaKnown RBP3.77□□□□□ -1.81
CLK1-206ENST00000461326 SLC36A4Q6YBV0 504 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 CHST3Q7LGC8 479 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 CCDC186Q7Z3E2 898 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 HAUS6Q7Z4H7 955 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 PCDH20Q8N6Y1 951 aaKnown RBP3.77□□□□□ -1.81
CLK1-206ENST00000461326 NKAIN3Q8N8D7 197 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 NRACQ8N912 160 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 OR10S1Q8NGN2 331 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 HM13Q8TCT9 377 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 LPGAT1Q92604 370 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 ORAI1Q96D31 301 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 LYZL4Q96KX0 146 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 SMC6Q96SB8 1091 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 SLC25A33Q9BSK2 321 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 CCDC106Q9BWC9 280 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 KCNN2Q9H2S1 579 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 BCCIPQ9P287 314 aaKnown RBP eCLIP3.77□□□□□ -1.81
CLK1-206ENST00000461326 GAGE2DQ9UEU5 116 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 GIMAP2Q9UG22 337 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 CCL27Q9Y4X3 112 aa3.77□□□□□ -1.81
CLK1-206ENST00000461326 ZNF541Q9H0D2 1346 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 H0YIN7 160 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 H3BNX3 289 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 CLGNO14967 610 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 IPO8O15397 1037 aaKnown RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 NDUFS4O43181 175 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 PRAMEF11O60813 436 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 TBCAO75347 108 aaKnown RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 RSL1D1O76021 490 aaKnown RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 AFPP02771 609 aaKnown RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 QDPRP09417 244 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 HOXC6P09630 235 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 CCDC175P0C221 793 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 IGHV4-30-4P0DP06 118 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 SRCP12931 536 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 UGT1A1P22309 533 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 SP100P23497 879 aaPredicted RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 TMF1P82094 1093 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 HLFQ16534 295 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 ODF3L2Q3SX64 289 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 FAM69BQ5VUD6 431 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 ZDHHC20Q5W0Z9 365 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 CST9LP1Q5W188 147 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 FAM109BQ6ICB4 259 aaPredicted RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 CCNI2Q6ZMN8 369 aaPredicted RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 CLEC17AQ6ZS10 378 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 INTS8Q75QN2 995 aaKnown RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 GPR180Q86V85 440 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 NRROSQ86YC3 692 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 MAML2Q8IZL2 1156 aaPredicted RBP3.76□□□□□ -1.81
CLK1-206ENST00000461326 BEST3Q8N1M1 668 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 GCSAMQ8N6F7 178 aa3.76□□□□□ -1.81
CLK1-206ENST00000461326 TDRD5Q8NAT2 981 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms