RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PYGMP11217 842 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 ITIH1P19827 911 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 SLC5A2P31639 672 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 UCNP55089 124 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 TMPRSS3P57727 454 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 EIF3EP60228 445 aaKnown RBP18.69■□□□□ 0.58
COL5A1-203ENST00000460264 CXADRP78310 365 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 SQSTM1Q13501 440 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 C16orf72Q14CZ0 275 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 KHDC1Q4VXA5 237 aaKnown RBP18.69■□□□□ 0.58
COL5A1-203ENST00000460264 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.69■□□□□ 0.58
COL5A1-203ENST00000460264 NKAIN2Q5VXU1 208 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 ITPRIPL1Q6GPH6 555 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 CRTC3Q6UUV7 619 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 ZNF761Q86XN6 746 aaPredicted RBP18.69■□□□□ 0.58
COL5A1-203ENST00000460264 JAMLQ86YT9 394 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 BLOC1S5Q8TDH9 187 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 VPS35Q96QK1 796 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 FAM118BQ9BPY3 351 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 DESI2Q9BSY9 194 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 FSD1LQ9BXM9 530 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 TRIM10Q9UDY6 481 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 SSUH2Q9Y2M2 353 aa18.69■□□□□ 0.58
COL5A1-203ENST00000460264 ATRXP46100 2492 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 A0A0U1RQJ8 604 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 MTX2O75431 263 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 ANXA9O76027 345 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 TJP3O95049 919 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 RBP3P10745 1247 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 F3P13726 295 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 ETV5P41161 510 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 CETN2P41208 172 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 CLCNKAP51800 687 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 GEMP55040 296 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 GPLD1P80108 840 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 HHEXQ03014 270 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 CFHR1Q03591 330 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 CLN3Q13286 438 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 ATP13A5Q4VNC0 1218 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 IYDQ6PHW0 289 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 GPR155Q7Z3F1 870 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 PEX26Q7Z412 305 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 GLT6D1Q7Z4J2 308 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 SPC24Q8NBT2 197 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 OR4D9Q8NGE8 314 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 CCDC74BQ96LY2 380 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 SLC38A3Q99624 504 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 FERMT1Q9BQL6 677 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 CPNE5Q9HCH3 593 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 SARS2Q9NP81 518 aaKnown RBP18.68■□□□□ 0.58
COL5A1-203ENST00000460264 IL26Q9NPH9 171 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 KLC4Q9NSK0 619 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 IL17CQ9P0M4 197 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 ACSL6Q9UKU0 697 aa18.68■□□□□ 0.58
COL5A1-203ENST00000460264 KIR2DS5A0A0G2JLQ3 304 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 A0A0G2JNG1 304 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 KIR2DS3K7RE56 304 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 HGSO14964 777 aaPredicted RBP18.67■□□□□ 0.58
COL5A1-203ENST00000460264 NVLO15381 856 aaKnown RBP18.67■□□□□ 0.58
COL5A1-203ENST00000460264 KCNN4O15554 427 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 VEGFDO43915 354 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 SNX2O60749 519 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 STK10O94804 968 aaKnown RBP18.67■□□□□ 0.58
COL5A1-203ENST00000460264 SLC2A4P14672 509 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 LIMK2P53671 638 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 KIF5AQ12840 1032 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 KIR2DS5Q14953 304 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 PLA2G4EQ3MJ16 856 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 ANKRD20A2Q5SQ80 823 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 ANKRD20A1Q5TYW2 823 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 ANKRD20A3Q5VUR7 823 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 ZDHHC20Q5W0Z9 365 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 LRRTM4Q86VH4 590 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 TXLNBQ8N3L3 684 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 RCBTB1Q8NDN9 531 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 UBL7Q96S82 380 aaPredicted RBP18.67■□□□□ 0.58
COL5A1-203ENST00000460264 DPYSL5Q9BPU6 564 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 FICDQ9BVA6 458 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 OSGEPL1Q9H4B0 414 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 STN1Q9H668 368 aaKnown RBP18.67■□□□□ 0.58
COL5A1-203ENST00000460264 PRDM8Q9NQV8 689 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 SLC23A2Q9UGH3 650 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 AMFRQ9UKV5 643 aa18.67■□□□□ 0.58
COL5A1-203ENST00000460264 PACSIN2Q9UNF0 486 aaPredicted RBP18.67■□□□□ 0.58
COL5A1-203ENST00000460264 PRAMEF33A0A0G2JMD5 474 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 PRR19A6NJB7 356 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 MIF4GDA9UHW6 222 aaKnown RBP18.66■□□□□ 0.58
COL5A1-203ENST00000460264 KMOO15229 486 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 PRAMEF10O60809 474 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 AGTP01019 485 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 THRAP10827 490 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 ZNF7P17097 686 aaPredicted RBP18.66■□□□□ 0.58
COL5A1-203ENST00000460264 PSMB4P28070 264 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 SPAM1P38567 509 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 NFATC2Q13469 925 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 TRA2AQ13595 282 aaKnown RBP eCLIP18.66■□□□□ 0.58
COL5A1-203ENST00000460264 INSCQ1MX18 579 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 DARS2Q6PI48 645 aaKnown RBP18.66■□□□□ 0.58
COL5A1-203ENST00000460264 FAM151BQ6UXP7 276 aa18.66■□□□□ 0.58
COL5A1-203ENST00000460264 SLC9B2Q86UD5 537 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms