RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 LRIT1Q9P2V4 623 aa15.96■□□□□ 0.15
CD28-203ENST00000458610 FKBPLQ9UIM3 349 aa15.96■□□□□ 0.15
CD28-203ENST00000458610 KCTD3Q9Y597 815 aa15.96■□□□□ 0.15
CD28-203ENST00000458610 CTAGE9A4FU28 777 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 KLHL33A6NCF5 533 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 TMEM8BA6NDV4 472 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 USP27XA6NNY8 438 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 RHPN2P1A8MT19 583 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 CFAP99D6REC4 459 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 ZSCAN5DPP0CG00 497 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 ACP5P13686 325 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 ZNF7P17097 686 aaPredicted RBP15.95■□□□□ 0.14
CD28-203ENST00000458610 ADRA1DP25100 572 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 COILP38432 576 aaPredicted RBP15.95■□□□□ 0.14
CD28-203ENST00000458610 ZNF140P52738 457 aaPredicted RBP15.95■□□□□ 0.14
CD28-203ENST00000458610 NFATC2Q13469 925 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 HLTFQ14527 1009 aaKnown RBP eCLIP15.95■□□□□ 0.14
CD28-203ENST00000458610 POU6F1Q14863 301 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 CYP1B1Q16678 543 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 INSCQ1MX18 579 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 CERCAMQ5T4B2 595 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 SNX20Q7Z614 316 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 C17orf82Q86X59 251 aaPredicted RBP15.95■□□□□ 0.14
CD28-203ENST00000458610 OR13C4Q8NGS5 318 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 COG1Q8WTW3 980 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 CCDC74AQ96AQ1 378 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 RANBP9Q96S59 729 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 NAPGQ99747 312 aaPredicted RBP15.95■□□□□ 0.14
CD28-203ENST00000458610 TIMM29Q9BSF4 260 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 ARFGAP3Q9NP61 516 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 CASS4Q9NQ75 786 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 CRLS1Q9UJA2 301 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 PYCARDQ9ULZ3 195 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 PRKAB1Q9Y478 270 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 PLEKHM1Q9Y4G2 1056 aa15.95■□□□□ 0.14
CD28-203ENST00000458610 TMX2-CTNND1H3BSU7 103 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 H7C0S8 307 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 ECEL1O95672 775 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 KRT14P02533 472 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 AKT1P31749 480 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 GPR3P46089 330 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 NPY2RP49146 381 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 FNTAP49354 379 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 TMPRSS15P98073 1019 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 TARDBPQ13148 414 aaKnown RBP eCLIP15.94■□□□□ 0.14
CD28-203ENST00000458610 SPIDRQ14159 915 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 PTPRCAPQ14761 206 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 CLPPQ16740 277 aaPredicted RBP15.94■□□□□ 0.14
CD28-203ENST00000458610 PERM1Q5SV97 790 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 ZNF648Q5T619 568 aaPredicted RBP15.94■□□□□ 0.14
CD28-203ENST00000458610 GPRC6AQ5T6X5 926 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 CDCP2Q5VXM1 449 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 PAPD7Q5XG87 772 aaKnown RBP15.94■□□□□ 0.14
CD28-203ENST00000458610 CCDC137Q6PK04 289 aaKnown RBP15.94■□□□□ 0.14
CD28-203ENST00000458610 UNQ6494/PRO21346Q6UXR6 183 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 RBM44Q6ZP01 1051 aaKnown RBP15.94■□□□□ 0.14
CD28-203ENST00000458610 TRAPPC5Q8IUR0 188 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 ARL14Q8N4G2 192 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 DCBLD1Q8N8Z6 715 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 PEX13Q92968 403 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 SH3KBP1Q96B97 665 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 CDKN2AIPNLQ96HQ2 116 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 TTC1Q99614 292 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 KCND1Q9NSA2 647 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 KLC4Q9NSK0 619 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 BFARQ9NZS9 450 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 RNF14Q9UBS8 474 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 TMPRSS11EQ9UL52 423 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 RIMKLBQ9ULI2 386 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 SAR1BQ9Y6B6 198 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 DCHS1Q96JQ0 3298 aa15.94■□□□□ 0.14
CD28-203ENST00000458610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.93■□□□□ 0.14
CD28-203ENST00000458610 KIR2DS5A0A0G2JLQ3 304 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 A0A0G2JNG1 304 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 FAM149AA5PLN7 773 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 MROH6A6NGR9 719 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 AGAP14A8MT82 685 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 KIR2DS3K7RE56 304 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 PHF2O75151 1096 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 MTX2O75431 263 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 IDSP22304 550 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 MC4RP32245 332 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 PAFAH1B1P43034 410 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 XIAPP98170 497 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 CACNG1Q06432 222 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 KIR2DS5Q14953 304 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 ZRANB3Q5FWF4 1079 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 PCID2Q5JVF3 399 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 TMEM220Q6QAJ8 160 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 CRTC3Q6UUV7 619 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 PRUNE1Q86TP1 453 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 SLC9B2Q86UD5 537 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 NAGSQ8N159 534 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 GLIS1Q8NBF1 620 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 PPHLN1Q8NEY8 458 aaKnown RBP15.93■□□□□ 0.14
CD28-203ENST00000458610 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.93■□□□□ 0.14
CD28-203ENST00000458610 GFM1Q96RP9 751 aaKnown RBP15.93■□□□□ 0.14
CD28-203ENST00000458610 COPS8Q99627 209 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 NRSN2Q9GZP1 204 aa15.93■□□□□ 0.14
CD28-203ENST00000458610 LRRN3Q9H3W5 708 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms