RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TIPARPQ7Z3E1 657 aaKnown RBP21.25■□□□□ 0.99
CPNE1-220ENST00000458038 VSIG1Q86XK7 387 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 RNF157Q96PX1 679 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 SRPK1Q96SB4 655 aaKnown RBP21.25■□□□□ 0.99
CPNE1-220ENST00000458038 XPO4Q9C0E2 1151 aaKnown RBP21.25■□□□□ 0.99
CPNE1-220ENST00000458038 OR2AG1Q9H205 316 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 MAGEE1Q9HCI5 957 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 PRDM8Q9NQV8 689 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 KLC4Q9NSK0 619 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 ADGRG1Q9Y653 693 aa21.25■□□□□ 0.99
CPNE1-220ENST00000458038 CHUKO15111 745 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 KMOO15229 486 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 MTA2O94776 668 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 VIPP01282 170 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 ZNF8P17098 575 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-220ENST00000458038 TCN2P20062 427 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 STAT5AP42229 794 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 SEPT6Q14141 434 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 SLC14A2Q15849 920 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 ZFYVE27Q5T4F4 411 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 TMEM26Q6ZUK4 368 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 PTRH1Q86Y79 214 aaKnown RBP21.24■□□□□ 0.99
CPNE1-220ENST00000458038 TRAM1L1Q8N609 369 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 CPLX3Q8WVH0 158 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 CTNNBL1Q8WYA6 563 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-220ENST00000458038 C9orf72Q96LT7 481 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 PLEKHG4BQ96PX9 1271 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 APMAPQ9HDC9 416 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 KCTD3Q9Y597 815 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 PCDHB3Q9Y5E6 796 aa21.24■□□□□ 0.99
CPNE1-220ENST00000458038 KCNK1O00180 336 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 VEGFDO43915 354 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 PRKAR1AP10644 381 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 KDELR1P24390 212 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 TAS2R40P59535 323 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 IL11RAQ14626 422 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 TMC3Q7Z5M5 1100 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 TRIM48Q8IWZ4 208 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 RBM12BQ8IXT5 1001 aaKnown RBP21.23■□□□□ 0.99
CPNE1-220ENST00000458038 STARD8Q92502 1023 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 GLYATL1Q969I3 302 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 TIMM29Q9BSF4 260 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 TBC1D10AQ9BXI6 508 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 OSGEPL1Q9H4B0 414 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 SIDT1Q9NXL6 827 aaKnown RBP21.23■□□□□ 0.99
CPNE1-220ENST00000458038 KLHL3Q9UH77 587 aa21.23■□□□□ 0.99
CPNE1-220ENST00000458038 RP1L1Q8IWN7 2480 aaPredicted RBP21.23■□□□□ 0.99
CPNE1-220ENST00000458038 UBXN7O94888 489 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 ZNF7P17097 686 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-220ENST00000458038 PDK1Q15118 436 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 INSCQ1MX18 579 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 COLEC12Q5KU26 742 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 CCDC70Q6NSX1 233 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 CAVIN1Q6NZI2 390 aaKnown RBP21.22■□□□□ 0.99
CPNE1-220ENST00000458038 CYB5D1Q6P9G0 228 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 WASH2PQ6VEQ5 465 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 ADGRG6Q86SQ4 1221 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 NT5DC3Q86UY8 548 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 LRRTM4Q86VH4 590 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 CNTD1Q8N815 330 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 GPR26Q8NDV2 337 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 EID2BQ96D98 161 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 IMP4Q96G21 291 aaKnown RBP21.22■□□□□ 0.99
CPNE1-220ENST00000458038 TRIB3Q96RU7 358 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 ULBP3Q9BZM4 244 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 BRD8Q9H0E9 1235 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 EPN3Q9H201 632 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 WASH6PQ9NQA3 447 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 NENFQ9UMX5 172 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 RPS6KL1Q9Y6S9 549 aa21.22■□□□□ 0.99
CPNE1-220ENST00000458038 ZFXP17010 805 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-220ENST00000458038 AMD1P17707 334 aa21.21■□□□□ 0.99
CPNE1-220ENST00000458038 HNRNPH3P31942 346 aaKnown RBP21.21■□□□□ 0.99
CPNE1-220ENST00000458038 FOXM1Q08050 763 aa21.21■□□□□ 0.99
CPNE1-220ENST00000458038 SKIDA1Q1XH10 827 aa21.21■□□□□ 0.99
CPNE1-220ENST00000458038 ABRAXAS1Q6UWZ7 409 aa21.21■□□□□ 0.99
CPNE1-220ENST00000458038 C6orf15Q6UXA7 325 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-220ENST00000458038 UNC5BQ8IZJ1 945 aa21.21■□□□□ 0.99
CPNE1-220ENST00000458038 GPR63Q9BZJ6 419 aa21.21■□□□□ 0.99
CPNE1-220ENST00000458038 SLC25A51Q9H1U9 297 aa21.21■□□□□ 0.99
CPNE1-220ENST00000458038 POT1Q9NUX5 634 aa21.21■□□□□ 0.99
CPNE1-220ENST00000458038 ZNF106Q9H2Y7 1883 aaKnown RBP21.2■□□□□ 0.98
CPNE1-220ENST00000458038 VCLP18206 1134 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 OAS2P29728 719 aaKnown RBP21.2■□□□□ 0.98
CPNE1-220ENST00000458038 SLC19A1P41440 591 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 FOXK1P85037 733 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 CDK18Q07002 472 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 AP1B1Q10567 949 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 ZBTB17Q13105 803 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 GALNT3Q14435 633 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 SLC18A3Q16572 532 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 DEFB109BQ30KR1 87 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 AGAP9Q5VTM2 703 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 PLD5Q8N7P1 536 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-220ENST00000458038 LRRN4Q8WUT4 740 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 RAPGEF5Q92565 580 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 ZDHHC12Q96GR4 267 aa21.2■□□□□ 0.98
CPNE1-220ENST00000458038 MAK16Q9BXY0 300 aaKnown RBP21.2■□□□□ 0.98
CPNE1-220ENST00000458038 ZNF768Q9H5H4 540 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms