RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 SRP54P61011 504 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 PPARDQ03181 441 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 TMEM115Q12893 351 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 ITIH4Q14624 930 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 CRYMQ14894 314 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 FASTKD3Q14CZ7 662 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 ZRANB3Q5FWF4 1079 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 TEX35Q5T0J7 233 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 CERS6Q6ZMG9 384 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 UNC5AQ6ZN44 842 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 DBX2Q6ZNG2 339 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 KANSL1Q7Z3B3 1105 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 TRIM74Q86UV6 250 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 SERPINA9Q86WD7 417 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 LMNTD2Q8IXW0 634 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 FBXO36Q8NEA4 188 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 OR6P1Q8NGX9 317 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 HEXDCQ8WVB3 486 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 TSPYL1Q9H0U9 437 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 FAM96AQ9H5X1 160 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 GAREM1Q9H706 876 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 MRPL40Q9NQ50 206 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 RXFP3Q9NSD7 469 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 CATSPERZQ9NTU4 200 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 ZDHHC3Q9NYG2 299 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 KLQ9UEF7 1012 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 ZC3H7BQ9UGR2 993 aaKnown RBP11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 CRLS1Q9UJA2 301 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 CHMP2BQ9UQN3 213 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 TMEM98Q9Y2Y6 226 aa11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 COL5A1P20908 1838 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC12-212ENST00000457845 CD3EAPO15446 510 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 YKT6O15498 198 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PCDHGA12O60330 932 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 GFRA3O60609 400 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 RASGRP1O95267 797 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 ASMTLO95671 621 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 ZNF8P17098 575 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 JUNDP17535 347 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 OGNP20774 298 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 TNFRSF8P28908 595 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 ARRB1P49407 418 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 HNRNPKP61978 463 aaKnown RBP eCLIP11.63□□□□□ -0.552e-6■■■■□ 23.3
TRAPPC12-212ENST00000457845 B4GALNT1Q00973 533 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 SEMA3AQ14563 771 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 DBN1Q16643 649 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 LONRF1Q17RB8 773 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 TYSND1Q2T9J0 566 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PYCR3Q53H96 274 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 FASTKD1Q53R41 847 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 HP1BP3Q5SSJ5 553 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PRAMEF14Q5SWL7 426 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 ZNF648Q5T619 568 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 LYPLAL1Q5VWZ2 237 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PACS1Q6VY07 963 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 CEP128Q6ZU80 1094 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 CYS1Q717R9 158 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 ANKMY2Q8IV38 441 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 ZBED8Q8IZ13 594 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PHACTR4Q8IZ21 702 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 MINDY1Q8N5J2 469 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PYROXD1Q8WU10 500 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 IFT81Q8WYA0 676 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 TSACCQ96A04 125 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PDXPQ96GD0 296 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 FMO2Q99518 471 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 COPS8Q99627 209 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 TCEAL2Q9H3H9 227 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 ANKZF1Q9H8Y5 726 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 IL21RQ9HBE5 538 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 ARFGAP3Q9NP61 516 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 SAYSD1Q9NPB0 183 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 TRNAU1APQ9NX07 287 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 MOCS1Q9NZB8 636 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 MARCH4Q9P2E8 410 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 MTRF1LQ9UGC7 380 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 SUFUQ9UMX1 484 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 GPR34Q9UPC5 381 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PCDHGB2Q9Y5G2 931 aa11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 PCYT1BQ9Y5K3 369 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.63□□□□□ -0.55
TRAPPC12-212ENST00000457845 H3BM21 787 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 SGTAO43765 313 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 MTX2O75431 263 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 PIAS2O75928 621 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 CDK14O94921 469 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 TNFP01375 233 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 GSTA2P09210 222 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 EPHA8P29322 1005 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 NSG1P42857 185 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 MAGEA4P43358 317 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 TTPAP49638 278 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 CCT8P50990 548 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 LIMK1P53667 647 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 BNIP3Q12983 259 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 SLC14A1Q13336 389 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 HLTFQ14527 1009 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 ZNF542PQ5EBM4 170 aa11.62□□□□□ -0.55
TRAPPC12-212ENST00000457845 AARS2Q5JTZ9 985 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms