RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CAMK1DQ8IU85 385 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ADGRG5Q8IZF4 528 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 CARNMT1Q8N4J0 409 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TMEM199Q8N511 208 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TRPV3Q8NET8 790 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 GRIN3AQ8TCU5 1115 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 GPR152Q8TDT2 470 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 TFAP2CQ92754 450 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ISG20Q96AZ6 181 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 CENPNQ96H22 339 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PRPF18Q99633 342 aaKnown RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SLC29A1Q99808 456 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 C9orf16Q9BUW7 83 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 OLAHQ9NV23 265 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 MTRRQ9UBK8 725 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 LEF1Q9UJU2 399 aaPredicted RBP12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF225Q9UK10 706 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PCDHGB4Q9UN71 923 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PCDHB1Q9Y5F3 818 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 PCDHGB5Q9Y5G0 923 aa12.42□□□□□ -0.42
ECHDC1-209ENST00000454591 SCN8AQ9UQD0 1980 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 PLXNA4Q9HCM2 1894 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 UBA6A0AVT1 1052 aaPredicted RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 FAM234BA2RU67 622 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ASPDHA6ND91 283 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF840PA6NDX5 716 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF839A8K0R7 811 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ANKRD66B4E2M5 251 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 CDC7O00311 574 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 E2F3O00716 465 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ARPC2O15144 300 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 STC2O76061 302 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 GALTP07902 379 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 RHOCP08134 193 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 RPS3P23396 243 aaKnown RBP eCLIP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 MYF6P23409 242 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 PSMA4P25789 261 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 GRIA3P42263 894 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 CCT8P50990 548 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 IL2P60568 153 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 DUSP4Q13115 394 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF177Q13360 481 aaPredicted RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 GK3PQ14409 553 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ATP6AP1Q15904 470 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 MYLK3Q32MK0 819 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 VPS26BQ4G0F5 336 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 HECTD3Q5T447 861 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 IL31Q6EBC2 164 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 NCEH1Q6PIU2 408 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 CERS6Q6ZMG9 384 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 LRRC8DQ7L1W4 858 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 NPAS4Q8IUM7 802 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 DDIASQ8IXT1 998 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 RNF168Q8IYW5 571 aaPredicted RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 RYBPQ8N488 228 aaPredicted RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 EXT2Q93063 718 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 RMDN1Q96DB5 314 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 TRMT2BQ96GJ1 504 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 KCNA7Q96RP8 456 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 CD320Q9NPF0 282 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF639Q9UID6 485 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 TRMT6Q9UJA5 497 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 MYRFQ9Y2G1 1151 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 PCDHB7Q9Y5E2 793 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 TNPO3Q9Y5L0 923 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 RAI2Q9Y5P3 530 aa12.41□□□□□ -0.42
ECHDC1-209ENST00000454591 BPTFQ12830 3046 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 ANAPC1Q9H1A4 1944 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 A0A1B0GTL3 188 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 NPEPPSL1A6NEC2 478 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 GOLGA8CPA6NN73 597 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 GFRA2O00451 464 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 DLGAP1O14490 977 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 SNX2O60749 519 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 OR6B1O95007 311 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 CD160O95971 181 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 ENO2P09104 434 aaPredicted RBP12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 LINC00032P0C843 101 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 PIRTP0C851 137 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 FASP25445 335 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 PPP3CCP48454 512 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 SCNN1BP51168 640 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 HK3P52790 923 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 ATXN3P54252 364 aaPredicted RBP12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 NME5P56597 212 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 KCNK10P57789 538 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 EMX2Q04743 252 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 RPS6KA2Q15349 733 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 AASDHQ4L235 1098 aaPredicted RBP12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 ADGRF1Q5T601 910 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 AP1ARQ63HQ0 302 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 CXorf57Q6NSI4 855 aaKnown RBP12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 PSAPL1Q6NUJ1 521 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 LAYNQ6UX15 382 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 RBM44Q6ZP01 1051 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms