RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 HTR3CQ8WXA8 447 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 PMEPA1Q969W9 287 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 RBM41Q96IZ5 413 aaKnown RBP12.21□□□□□ -0.45
MSH5-209ENST00000450148 PLEKHG4BQ96PX9 1271 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 VPS35Q96QK1 796 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 VAT1Q99536 393 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 HEMGNQ9BXL5 484 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 B3GNT4Q9C0J1 378 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 OR2AG1Q9H205 316 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 C10orf88Q9H8K7 445 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 SARS2Q9NP81 518 aaKnown RBP12.21□□□□□ -0.45
MSH5-209ENST00000450148 RAD18Q9NS91 495 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 IL17CQ9P0M4 197 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 SCHIP1Q9P0W5 487 aaPredicted RBP12.21□□□□□ -0.45
MSH5-209ENST00000450148 KLHL8Q9P2G9 620 aaPredicted RBP12.21□□□□□ -0.45
MSH5-209ENST00000450148 PCDHA3Q9Y5H8 950 aa12.21□□□□□ -0.45
MSH5-209ENST00000450148 FASNP49327 2511 aaKnown RBP12.21□□□□□ -0.45
MSH5-209ENST00000450148 BTNL10A8MVZ5 291 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 GPR89AB7ZAQ6 455 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
MSH5-209ENST00000450148 F5H423 210 aaPredicted RBP12.2□□□□□ -0.46
MSH5-209ENST00000450148 ERVH48-1M5A8F1 160 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 GAPDHSO14556 408 aaPredicted RBP12.2□□□□□ -0.46
MSH5-209ENST00000450148 PJA2O43164 708 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 MTX2O75431 263 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 GPR89BP0CG08 455 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 LIPCP11150 499 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 CTNNA2P26232 953 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 RBL1P28749 1068 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 PTPN7P35236 360 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 MAPK10P53779 464 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 COPS2P61201 443 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 UBE2IP63279 158 aaKnown RBP12.2□□□□□ -0.46
MSH5-209ENST00000450148 RHDQ02161 417 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 HHEXQ03014 270 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 XRCC4Q13426 336 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 TRA2AQ13595 282 aaKnown RBP eCLIP12.2□□□□□ -0.46
MSH5-209ENST00000450148 SLC1A5Q15758 541 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 ATP13A5Q4VNC0 1218 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 TMEM71Q6P5X7 295 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 C11orf96Q7Z7L8 435 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 ZFAND4Q86XD8 727 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 TMTC1Q8IUR5 882 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 CCDC50Q8IVM0 306 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 LRRC57Q8N9N7 239 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 ACRBPQ8NEB7 543 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 ACTL9Q8TC94 416 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 ALG3Q92685 438 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 CCNL2Q96S94 520 aaPredicted RBP12.2□□□□□ -0.46
MSH5-209ENST00000450148 SRPK1Q96SB4 655 aaKnown RBP12.2□□□□□ -0.46
MSH5-209ENST00000450148 SLC38A3Q99624 504 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 TRABDQ9H4I3 376 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 BPIFA1Q9NP55 256 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 IL26Q9NPH9 171 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 PRDM8Q9NQV8 689 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 EFR3BQ9Y2G0 817 aa12.2□□□□□ -0.46
MSH5-209ENST00000450148 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.2□□□□□ -0.46
MSH5-209ENST00000450148 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 ZW10O43264 779 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 MPSTP25325 297 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 OTUD4Q01804 1114 aaKnown RBP12.19□□□□□ -0.46
MSH5-209ENST00000450148 MPP3Q13368 585 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 MSLNQ13421 630 aaPredicted RBP12.19□□□□□ -0.46
MSH5-209ENST00000450148 BIRC2Q13490 618 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 KIR2DS5Q14953 304 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 CCDC70Q6NSX1 233 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 AADACL2Q6P093 401 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 CRTC3Q6UUV7 619 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 ARHGAP22Q7Z5H3 698 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 PHYKPLQ8IUZ5 450 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 SLC25A41Q8N5S1 370 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 BMPERQ8N8U9 685 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 WBP1Q96G27 269 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 DPYSL5Q9BPU6 564 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 LUC7LQ9NQ29 371 aaKnown RBP12.19□□□□□ -0.46
MSH5-209ENST00000450148 KLC4Q9NSK0 619 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 ZNF624Q9P2J8 865 aaPredicted RBP12.19□□□□□ -0.46
MSH5-209ENST00000450148 TRHDEQ9UKU6 1024 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 PCDHGA3Q9Y5H0 932 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 COL6A6A6NMZ7 2263 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 BAHCC1Q9P281 2608 aa12.19□□□□□ -0.46
MSH5-209ENST00000450148 A0A0U1RQJ8 604 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 GRID2IPA4D2P6 1211 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 OR5K4A6NMS3 321 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 KMOO15229 486 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 GPR39O43194 453 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 VEGFDO43915 354 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 SNX2O60749 519 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 BRAFP15056 766 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 ZNF7P17097 686 aaPredicted RBP12.18□□□□□ -0.46
MSH5-209ENST00000450148 XRCC1P18887 633 aaPredicted RBP12.18□□□□□ -0.46
MSH5-209ENST00000450148 WT1P19544 449 aaPredicted RBP12.18□□□□□ -0.46
MSH5-209ENST00000450148 HLA-DPA1P20036 260 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 ADRA1AP35348 466 aa12.18□□□□□ -0.46
MSH5-209ENST00000450148 SLC19A1P41440 591 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms