RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	IGLV3-27	P01718	113 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ALDH2	P05091	517 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ITGB1	P05556	798 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SERPINF2	P08697	491 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	OR4Q2	P0C623	313 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	HAPLN1	P10915	354 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ANPEP	P15144	967 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	RAG1	P15918	1043 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	OGN	P20774	298 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	TACR2	P21452	398 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SAT1	P21673	171 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	PIK3R1	P27986	724 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CTGF	P29279	349 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CCND3	P30281	292 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	OR1E1	P30953	314 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CPOX	P36551	454 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	PPARG	P37231	505 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ETFB	P38117	255 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	PBX3	P40426	434 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CD86	P42081	329 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	LEPR	P48357	1165 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SLC11A2	P49281	568 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	NAGLU	P54802	743 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SESN3	P58005	492 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	RPL26	P61254	145 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	MPP1	Q00013	466 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	IRF9	Q00978	393 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SP3	Q02447	781 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	BTK	Q06187	659 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	KLC1	Q07866	573 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	GALNT1	Q10472	559 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	TBL3	Q12788	808 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	NOG	Q13253	232 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	GPR17	Q13304	367 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CTBP1	Q13363	440 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	OLIG2	Q13516	323 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SERINC3	Q13530	473 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CUL3	Q13618	768 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	BLMH	Q13867	455 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	RFTN1	Q14699	578 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	POLD3	Q15054	466 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ACAP2	Q15057	778 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	DLG2	Q15700	870 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SMAD1	Q15797	465 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CNGA3	Q16281	694 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	PLEKHN1	Q494U1	663 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	C5orf22	Q49AR2	442 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	MS4A13	Q5J8X5	152 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CLLU1OS	Q5K130	101 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	FAM182A	Q5T1J6	154 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	PIK3R6	Q5UE93	754 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	FAM171A1	Q5VUB5	890 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	RAP1GAP2	Q684P5	730 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	TRIM68	Q6AZZ1	485 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ESRP1	Q6NXG1	681 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ZFP1	Q6P2D0	407 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	GALNT18	Q6P9A2	607 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ARHGAP36	Q6ZRI8	547 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ANKS3	Q6ZW76	656 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	LRRC8D	Q7L1W4	858 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	MAVS	Q7Z434	540 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CTU1	Q7Z7A3	348 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	C14orf80	Q86SX3	495 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ZNF280B	Q86YH2	543 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ZNF683	Q8IZ20	524 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	FBXW8	Q8N3Y1	598 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	FSTL5	Q8N475	847 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CPSF7	Q8N684	471 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CCNYL1	Q8N7R7	359 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ZNF781	Q8N8C0	355 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	KY	Q8NBH2	561 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CATSPER1	Q8NEC5	780 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	GPR150	Q8NGU9	434 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	OR6P1	Q8NGX9	317 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	CEP70	Q8NHQ1	597 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	RP9	Q8TA86	221 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	RAET1E	Q8TD07	263 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	KCTD4	Q8WVF5	259 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	OVCA2	Q8WZ82	227 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	SEPT8	Q92599	483 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	AZIN2	Q96A70	460 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	PABPC5	Q96DU9	382 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	HMCES	Q96FZ2	354 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ZNF333	Q96JL9	665 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ASB2	Q96Q27	587 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	PANX3	Q96QZ0	392 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	NR1H4	Q96RI1	486 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ZNF184	Q99676	751 aa	Predicted RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	DDX50	Q9BQ39	737 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	TMEM175	Q9BSA9	504 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	ARHGAP39	Q9C0H5	1083 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	POLR1E	Q9GZS1	481 aa	Known RBP	4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	MAGEH1	Q9H213	219 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	POMK	Q9H5K3	350 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	EFCAB1	Q9HAE3	211 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	S100A14	Q9HCY8	104 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	NMRK2	Q9NPI5	230 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	STARD7	Q9NQZ5	370 aa		4.05	□□□□□ -1.76
PTPN12-208	ENST00000447995	TRMT13	Q9NUP7	481 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms