RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CREB3O43889 395 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 KIAA0754O94854 1291 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 UNC5CO95185 931 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 ADRB2P07550 413 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 THRAP10827 490 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 CTSEP14091 401 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 IGFBP2P18065 325 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 COMTP21964 271 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 GDF5P43026 501 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 LHX1P48742 406 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 SLC5A3P53794 718 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 MAZP56270 477 aaKnown RBP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 OTUD4Q01804 1114 aaKnown RBP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 PPARDQ03181 441 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 FOXE3Q13461 319 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 TRA2AQ13595 282 aaKnown RBP eCLIP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 NFYCQ13952 458 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 HLTFQ14527 1009 aaKnown RBP eCLIP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 ELOCQ15369 112 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 SYCP1Q15431 976 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 PDCD2Q16342 344 aaPredicted RBP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 C3AR1Q16581 482 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 SOWAHAQ2M3V2 549 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 C10orf120Q5SQS8 335 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 PIP5KL1Q5T9C9 394 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 VWA5B1Q5TIE3 1220 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 KCTD16Q68DU8 428 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 LVRNQ6Q4G3 990 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 MOXD1Q6UVY6 613 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 MMS22LQ6ZRQ5 1243 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 OVCH1Q7RTY7 1134 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 FGD2Q7Z6J4 655 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 ZC3H7AQ8IWR0 971 aaKnown RBP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 TMTC2Q8N394 836 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 ZADH2Q8N4Q0 377 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 KDM1BQ8NB78 822 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 FAM46DQ8NEK8 389 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 ROBO4Q8WZ75 1007 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 TTC17Q96AE7 1141 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 TMEM125Q96AQ2 219 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 STAMBPL1Q96FJ0 436 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 ELMO2Q96JJ3 720 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 CEP295NLQ96MC4 621 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 OR14A2Q96R54 314 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 SLC17A9Q9BYT1 436 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 NMUR1Q9HB89 426 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 KMT5AQ9NQR1 393 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 FBXO8Q9NRD0 319 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 RBM28Q9NW13 759 aaKnown RBP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 VPS54Q9P1Q0 977 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 C5AR2Q9P296 337 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 AGAP1Q9UPQ3 857 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 LUC7L2Q9Y383 392 aaKnown RBP4.97□□□□□ -1.61
SDCBP-205ENST00000447267 SNX9Q9Y5X1 595 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 SLC30A1Q9Y6M5 507 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 CNTRLQ7Z7A1 2325 aa4.97□□□□□ -1.61
SDCBP-205ENST00000447267 NPIPB8E9PQR5 432 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 SCDO00767 359 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 FPGTO14772 594 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 POLR1CO15160 346 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-205ENST00000447267 CDC14BO60729 498 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 FZD7O75084 574 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 PLA2G4BP0C869 781 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 TRIM49P0CI25 452 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 TRIM49CP0CI26 452 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 XRCC6P12956 609 aaKnown RBP eCLIP4.96□□□□□ -1.62
SDCBP-205ENST00000447267 STK19P49842 368 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-205ENST00000447267 TDGF1P3P51864 188 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 PFN3P60673 137 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 HGFACQ04756 655 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 KRTAP1-1Q07627 177 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 DMPKQ09013 629 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 CDC16Q13042 620 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 KEAP1Q14145 624 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 PRKD1Q15139 912 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-205ENST00000447267 MPPE1Q53F39 396 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 Q5PR19 223 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 SHEQ5VZ18 495 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 TMEM200BQ69YZ2 307 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 APOA5Q6Q788 366 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 IGFL3Q6UXB1 125 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 TECPR1Q7Z6L1 1165 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 CDC20BQ86Y33 519 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 GPR135Q8IZ08 494 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 TMEM86AQ8N2M4 240 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 FSTL5Q8N475 847 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-205ENST00000447267 OR4D9Q8NGE8 314 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 MYCBPAPQ8TBZ2 947 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 BICD2Q8TD16 824 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 KBTBD7Q8WVZ9 684 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 WASF1Q92558 559 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 DLG3Q92796 817 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 TMA16Q96EY4 203 aaKnown RBP4.96□□□□□ -1.62
SDCBP-205ENST00000447267 KLF6Q99612 283 aaPredicted RBP4.96□□□□□ -1.62
SDCBP-205ENST00000447267 ZPBPQ9BS86 351 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 BTBD2Q9BX70 525 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 B3GNT5Q9BYG0 378 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 EDEM3Q9BZQ6 932 aa4.96□□□□□ -1.62
SDCBP-205ENST00000447267 UCK2Q9BZX2 261 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms