RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 IPO13O94829 963 aaKnown RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 FASLGP48023 281 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 TKTL1P51854 596 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 TBX4P57082 545 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 KIAA1024LP59773 190 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 RPS15P62841 145 aaKnown RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 KRT83P78385 493 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 CHRNEQ04844 493 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 TRPC3Q13507 836 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 PWP1Q13610 501 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 TRIM29Q14134 588 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 ZRSR1Q15695 479 aaKnown RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 KLHL40Q2TBA0 621 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 WSCD2Q2TBF2 565 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 ZNF699Q32M78 642 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 ZNF667Q5HYK9 610 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 FAM26FQ5R3K3 315 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 IZUMO3Q5VZ72 239 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 FAM199XQ6PEV8 388 aaPredicted RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 LGI2Q8N0V4 545 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 ZBTB2Q8N680 514 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 BCORP1Q8N888 145 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 OR56A4Q8NGH8 313 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 OR10G6Q8NH81 332 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 ENOX1Q8TC92 643 aaKnown RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 COG1Q8WTW3 980 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 LARP4BQ92615 738 aaKnown RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 SLC39A13Q96H72 371 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 INTS4Q96HW7 963 aaKnown RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 ZHX3Q9H4I2 956 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 ABCC13Q9NSE7 274 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 TAAR2Q9P1P5 351 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 KCNN3Q9UGI6 736 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 LNPEPQ9UIQ6 1025 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 FARSAQ9Y285 508 aaKnown RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 OR1A2Q9Y585 309 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 INTS1Q8N201 2190 aaKnown RBP3.24□□□□□ -1.89
PMS1-215ENST00000447232 PCM1Q15154 2024 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 MGAM2Q2M2H8 2515 aa3.24□□□□□ -1.89
PMS1-215ENST00000447232 SERINC4A6NH21 518 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 FOXO6A8MYZ6 492 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 CREB3O43889 395 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 UBOX5O94941 541 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 DLATP10515 647 aaKnown RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 CD19P15391 556 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 TNNI1P19237 187 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 RRM1P23921 792 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 DNASE1P24855 282 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 CASP5P51878 434 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 SOX8P57073 446 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 PSMD6Q15008 389 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 HMBOX1Q6NT76 420 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 RPUSD3Q6P087 351 aaKnown RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 C22orf39Q6P5X5 142 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 FAM180AQ6UWF9 173 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 IGFL2Q6UWQ7 119 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 RUFY3Q7L099 469 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 CIR1Q86X95 450 aaPredicted RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 RASGRP3Q8IV61 690 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 SCML4Q8N228 414 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 ANKS4BQ8N8V4 417 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 SIMC1Q8NDZ2 872 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 NR4A3Q92570 626 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 ARHGEF26Q96DR7 871 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 NT5C1BQ96P26 610 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 OR6C1Q96RD1 312 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 PPP1R9BQ96SB3 815 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 PSMB7Q99436 277 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 PRMT1Q99873 361 aaKnown RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 ZNF559Q9BR84 538 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 GCM1Q9NP62 436 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 KBTBD4Q9NVX7 518 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 PLEKHA6Q9Y2H5 1048 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 GTF3C1Q12789 2109 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 C16orf96A6NNT2 1141 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 RASA4BC9J798 803 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 NEMP1O14524 444 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 EIF3DO15371 548 aaKnown RBP eCLIP3.23□□□□□ -1.89
PMS1-215ENST00000447232 RASA4O43374 803 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 NUAK1O60285 661 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 KLHL41O60662 606 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 PFKFB2O60825 505 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 HOXC4P09017 264 aaPredicted RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 TACR2P21452 398 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 PSMA5P28066 241 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 CDC16Q13042 620 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 MTM1Q13496 603 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 ATP1A4Q13733 1029 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 ZNF169Q14929 603 aaPredicted RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 CLEC16AQ2KHT3 1053 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 CES4AQ5XG92 561 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 RAP1GAP2Q684P5 730 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 FAAH2Q6GMR7 532 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 PODNL1Q6PEZ8 512 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 TMEM207Q6UWW9 146 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 GFRALQ6UXV0 394 aa3.23□□□□□ -1.89
PMS1-215ENST00000447232 ZNF761Q86XN6 746 aaPredicted RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 CIARTQ8N365 385 aaPredicted RBP3.23□□□□□ -1.89
PMS1-215ENST00000447232 GALNT16Q8N428 558 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms