RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ERVK-10P10266 1014 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 ITGALP20701 1170 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 CA5AP35218 305 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 NUDT1P36639 197 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 ACVR1Q04771 509 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 DPTQ07507 201 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 SLC14A1Q13336 389 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 THOC5Q13769 683 aaKnown RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 SLMAPQ14BN4 828 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 TRIP6Q15654 476 aaKnown RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 FASTKD1Q53R41 847 aaKnown RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 UBAP2Q5T6F2 1119 aaKnown RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 KIAA0930Q6ICG6 404 aaPredicted RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 LAYNQ6UX15 382 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 GCNT7Q6ZNI0 430 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 TRIM74Q86UV6 250 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 HEATR4Q86WZ0 1026 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 RAVER1Q8IY67 606 aaKnown RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 EIF1ADQ8N9N8 165 aaKnown RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 DENND6BQ8NEG7 585 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 ZSCAN5AQ9BUG6 496 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 CDH19Q9H159 772 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 CDC42EP4Q9H3Q1 356 aaKnown RBP17.07■□□□□ 0.32
LIME1-202ENST00000444951 GAREM1Q9H706 876 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 PLAC1Q9HBJ0 212 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 FAM169AQ9Y6X4 670 aa17.07■□□□□ 0.32
LIME1-202ENST00000444951 A0A1B0GVT2 93 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 ACSL3O95573 720 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 SOD1P00441 154 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 F7P08709 466 aaPredicted RBP17.06■□□□□ 0.32
LIME1-202ENST00000444951 FTH1P19P0C7X4 201 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 TSHRP16473 764 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 ARNTP27540 789 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 CSNK1EP49674 416 aaKnown RBP17.06■□□□□ 0.32
LIME1-202ENST00000444951 GPX6P59796 221 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 CACNG1Q06432 222 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 NFATC2Q13469 925 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 ITGA9Q13797 1035 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 ZNF648Q5T619 568 aaPredicted RBP17.06■□□□□ 0.32
LIME1-202ENST00000444951 ARMC3Q5W041 872 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 STEAP4Q687X5 459 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 TRMT10BQ6PF06 316 aaKnown RBP17.06■□□□□ 0.32
LIME1-202ENST00000444951 DOK6Q6PKX4 331 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 C3orf62Q6ZUJ4 267 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
LIME1-202ENST00000444951 SLCO6A1Q86UG4 719 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 KCNMB4Q86W47 210 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 GSDMBQ8TAX9 411 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 PEX13Q92968 403 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 BMFQ96LC9 184 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 ZDHHC5Q9C0B5 715 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 WDR26Q9H7D7 661 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 LRRC4CQ9HCJ2 640 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 TM9SF3Q9HD45 589 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 IARS2Q9NSE4 1012 aaKnown RBP17.06■□□□□ 0.32
LIME1-202ENST00000444951 CATSPERZQ9NTU4 200 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 MARCH4Q9P2E8 410 aaPredicted RBP17.06■□□□□ 0.32
LIME1-202ENST00000444951 NFKBIL1Q9UBC1 381 aaPredicted RBP17.06■□□□□ 0.32
LIME1-202ENST00000444951 PCOLCE2Q9UKZ9 415 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 PTPRBP23467 1997 aa17.06■□□□□ 0.32
LIME1-202ENST00000444951 CACNA1GO43497 2377 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 FAM221BA6H8Z2 402 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 TMEM8BA6NDV4 472 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 A6NNZ2 444 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 H7C0S8 307 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 CD3EAPO15446 510 aaKnown RBP17.05■□□□□ 0.32
LIME1-202ENST00000444951 MTX2O75431 263 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 SLC25A14O95258 325 aaPredicted RBP17.05■□□□□ 0.32
LIME1-202ENST00000444951 PSMA3P25788 255 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 FOXN2P32314 431 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 ARCN1P48444 511 aaKnown RBP17.05■□□□□ 0.32
LIME1-202ENST00000444951 PMS2P54278 862 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 CBLBQ13191 982 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 HLA-BQ31612 363 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 HSP90AA5PQ58FG0 334 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 NEPROQ6NW34 567 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 ADAMTSL4Q6UY14 1074 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 Q6ZSR6 202 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 SNX20Q7Z614 316 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 PIANPQ8IYJ0 282 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 TMEM145Q8NBT3 493 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 OR13H1Q8NG92 308 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.05■□□□□ 0.32
LIME1-202ENST00000444951 CERS2Q96G23 380 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 HIC2Q96JB3 615 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 APOOQ9BUR5 198 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 LGR4Q9BXB1 951 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 SLC17A6Q9P2U8 582 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 RAB21Q9UL25 225 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 TMPRSS11EQ9UL52 423 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 HS3ST3A1Q9Y663 406 aa17.05■□□□□ 0.32
LIME1-202ENST00000444951 TP53BP1Q12888 1972 aaPredicted RBP17.05■□□□□ 0.32
LIME1-202ENST00000444951 ZNF106Q9H2Y7 1883 aaKnown RBP17.05■□□□□ 0.32
LIME1-202ENST00000444951 TAF4O00268 1085 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 PIAS1O75925 651 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 TRIM16O95361 564 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 ASMTLO95671 621 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 CAPNS1P04632 268 aa17.04■□□□□ 0.32
LIME1-202ENST00000444951 PYGLP06737 847 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms