RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 SGSHP51688 502 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 SETMARQ53H47 684 aaPredicted RBP18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 AARS2Q5JTZ9 985 aaKnown RBP18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 NADSYN1Q6IA69 706 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 MSANTD2Q6P1R3 559 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 TMEM125Q96AQ2 219 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 BIRC7Q96CA5 298 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 OAS3Q9Y6K5 1087 aaKnown RBP18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 A0A1W2PQ67 120 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 PTGES3LE9PB15 166 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 GKP32189 559 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 CDK9P50750 372 aaKnown RBP18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 HUNKP57058 714 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 HMGCS1Q01581 520 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 TRAP1Q12931 704 aaKnown RBP18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 PTGR1Q14914 329 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 RAB39AQ14964 217 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 DHRSXQ8N5I4 330 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 PTCD2Q8WV60 388 aaKnown RBP18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 AURKBQ96GD4 344 aaPredicted RBP18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 AGPAT4Q9NRZ5 378 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 FARSBQ9NSD9 589 aaKnown RBP18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 ZNHIT2Q9UHR6 403 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 TMCO1Q9UM00 188 aa18.8■□□□□ 0.6
PAXBP1-204ENST00000443785 ZSWIM8A7E2V4 1837 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 E5RI56 91 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 TLR5O60602 858 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 RPP40O75818 363 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 ASGR1P07306 291 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 G6PDP11413 515 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 RHOQP17081 205 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 DNAJB2P25686 324 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 NAA20P61599 178 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 LSM3P62310 102 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 GNA12Q03113 381 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 NR6A1Q15406 480 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 MORN1Q5T089 497 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 MON1AQ86VX9 555 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 DENND1CQ8IV53 801 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 FUBP1Q96AE4 644 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 GPATCH1Q9BRR8 931 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 AARSD1Q9BTE6 412 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 CCDC90BQ9GZT6 254 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 GOLGA4Q13439 2230 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 SLC22A3O75751 556 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 GSNP06396 782 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 SERPINF2P08697 491 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 STC1P52823 247 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 TPD52P55327 224 aaPredicted RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 LCP2Q13094 533 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 GTDC1Q4AE62 458 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 BLOC1S3Q6QNY0 202 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 L3HYPDHQ96EM0 354 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 PLEKHG4BQ96PX9 1271 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 ING2Q9H160 280 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 AFF4Q9UHB7 1163 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 VPS4AQ9UN37 437 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 SLC8A2Q9UPR5 921 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 TLR6Q9Y2C9 796 aa18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 POLR3HQ9Y535 204 aaPredicted RBP18.79■□□□□ 0.6
PAXBP1-204ENST00000443785 ACOX3O15254 700 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 CAPN1P07384 714 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 BMP2P12643 396 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 ALDH4A1P30038 563 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 SLC6A4P31645 630 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 CYP2C18P33260 490 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 POLR2JP52435 117 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 SMYD5Q6GMV2 418 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 GLYATQ6IB77 296 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 PHACTR4Q8IZ21 702 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 UMODL1-AS1Q8N2C9 162 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 STAG3L4Q8TBR4 150 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 METTL6Q8TCB7 284 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 TM6SF2Q9BZW4 377 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 ZFYVE28Q9HCC9 887 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 MRPL40Q9NQ50 206 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 TLR9Q9NR96 1032 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 GID8Q9NWU2 228 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 TAS2R13Q9NYV9 303 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 SUN2Q9UH99 717 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 SARDHQ9UL12 918 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 DNAH14Q0VDD8 3507 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 TOR1BO14657 336 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 SNAP91O60641 907 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 SH3BGRLO75368 114 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 MC4RP32245 332 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 RPS9P46781 194 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 ALDH3B2P48448 385 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 SERINC3Q13530 473 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 LETMD1Q6P1Q0 360 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 RSPO2Q6UXX9 243 aaPredicted RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 MBOAT1Q6ZNC8 495 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 GALNT10Q86SR1 603 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 ZC3H7AQ8IWR0 971 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 DCP1BQ8IZD4 617 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 ANKFN1Q8N957 763 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 GFM2Q969S9 779 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 DTNBP1Q96EV8 351 aa18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 CENPNQ96H22 339 aaPredicted RBP18.78■□□□□ 0.6
PAXBP1-204ENST00000443785 THUMPD3Q9BV44 507 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms