RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 LRRTM4Q86VH4 590 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 C17orf53Q8N3J3 647 aaPredicted RBP14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 GDAP1Q8TB36 358 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 HEXDCQ8WVB3 486 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 ZNF514Q96K75 400 aaPredicted RBP14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 DNAJC1Q96KC8 554 aaKnown RBP14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 TTC25Q96NG3 672 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 IL22Q9GZX6 179 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 UGT1A7Q9HAW7 530 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 UGT1A10Q9HAW8 530 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 UGT1A8Q9HAW9 530 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 PIH1D1Q9NWS0 290 aaKnown RBP14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 BFARQ9NZS9 450 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 TAAR2Q9P1P5 351 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 PADI4Q9UM07 663 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 WASF3Q9UPY6 502 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 SLC30A1Q9Y6M5 507 aa14.86□□□□□ -0.03
CSNK1E-210ENST00000442216 TRBV5-4A0A0C4DH59 114 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 FAM221BA6H8Z2 402 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 NOBOXO60393 691 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 KCNJ13O60928 360 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 PNLIPP16233 465 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 AK4P27144 223 aaPredicted RBP14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 ACTR1BP42025 376 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 ACTR1AP61163 376 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 TMPRSS15P98073 1019 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 ACVR1Q04771 509 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 PPP1R7Q15435 360 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 KHDC1Q4VXA5 237 aaKnown RBP14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 PCID2Q5JVF3 399 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 TSTD2Q5T7W7 516 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 SYDE1Q6ZW31 735 aaPredicted RBP14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 CHST15Q7LFX5 561 aaPredicted RBP14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 C17orf82Q86X59 251 aaPredicted RBP14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 CACTIN-AS1Q8N1I8 211 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 GALNT15Q8N3T1 639 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 MCUQ8NE86 351 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 SGSM3Q96HU1 749 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 TIMM29Q9BSF4 260 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 DDX47Q9H0S4 455 aaKnown RBP14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 DPEP2Q9H4A9 486 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 SUDS3Q9H7L9 328 aaPredicted RBP14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 CRLS1Q9UJA2 301 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 TCAF1Q9Y4C2 921 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 ST14Q9Y5Y6 855 aa14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 DNMT3AQ9Y6K1 912 aaPredicted RBP14.85□□□□□ -0.03
CSNK1E-210ENST00000442216 KLHL33A6NCF5 533 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 MTX2O75431 263 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 TUBB4AP04350 444 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 RALBP11234 206 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 MLNP12872 115 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 GLB1P16278 677 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 MSH3P20585 1137 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 MC4RP32245 332 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 VPS41P49754 854 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 CACNG1Q06432 222 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 FOXC1Q12948 553 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 PTK6Q13882 451 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 TCEA2Q15560 299 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 SMAD1Q15797 465 aaKnown RBP14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 C14orf28Q4W4Y0 310 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 ZNF648Q5T619 568 aaPredicted RBP14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 SLC30A9Q6PML9 568 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 SYT10Q6XYQ8 523 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 ZNF534Q76KX8 674 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 TMPRSS7Q7RTY8 843 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 TMPRSS12Q86WS5 348 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 NXPE1Q8N323 547 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 KYQ8NBH2 561 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 PPHLN1Q8NEY8 458 aaKnown RBP14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 OR13J1Q8NGT2 312 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 WDR48Q8TAF3 677 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 IFI44Q8TCB0 444 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 ZDHHC1Q8WTX9 485 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 CPT1BQ92523 772 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 MRM3Q9HC36 420 aaKnown RBP14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 ARFGAP3Q9NP61 516 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 SPATS2LQ9NUQ6 558 aaKnown RBP14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 GULP1Q9UBP9 304 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 ANGPTL2Q9UKU9 493 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 NEUROG3Q9Y4Z2 214 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 PCYT1BQ9Y5K3 369 aaPredicted RBP14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 KNTC1P50748 2209 aa14.84□□□□□ -0.03
CSNK1E-210ENST00000442216 COL27A1Q8IZC6 1860 aaPredicted RBP14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 UNC13CQ8NB66 2214 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 TCRBV7S3A2A0A539 114 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 GPR39O43194 453 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 NUDT21O43809 227 aaKnown RBP14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 ACP5P13686 325 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 SLC2A4P14672 509 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 ZNF7P17097 686 aaPredicted RBP14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 CA5AP35218 305 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 PTGIRP43119 386 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 HLTFQ14527 1009 aaKnown RBP eCLIP14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 CCDC38Q502W7 563 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 GUSBP11Q6P575 273 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 DHRS13Q6UX07 377 aa14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 EFL1Q7Z2Z2 1120 aaKnown RBP14.83□□□□□ -0.04
CSNK1E-210ENST00000442216 PCGF5Q86SE9 256 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms