RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CRTC1Q6UUV9 634 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 ACVR1CQ8NER5 493 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 OR8D1Q8WZ84 308 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 LRCH3Q96II8 777 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 TMEM245Q9H330 911 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 C12orf65Q9H3J6 166 aaKnown RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 UBE2ZQ9H832 354 aaPredicted RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 INTS10Q9NVR2 710 aaKnown RBP8.04□□□□□ -1.12
CCDC39-201ENST00000442201 NDUFA13Q9P0J0 144 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 APPL1Q9UKG1 709 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 VPS9D1Q9Y2B5 631 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 DOCK8Q8NF50 2099 aa8.04□□□□□ -1.12
CCDC39-201ENST00000442201 MIA3Q5JRA6 1907 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TSPAN11A1L157 253 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 KPNA3O00505 521 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 CTSLP07711 333 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 PABPC4LP0CB38 370 aaKnown RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 CRABP2P29373 138 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 SOX9P48436 509 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 SMAD4Q13485 552 aaKnown RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 ELAVL3Q14576 367 aaKnown RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 INSCQ1MX18 579 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TYSND1Q2T9J0 566 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 ZRANB3Q5FWF4 1079 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 KYAT3Q6YP21 454 aaKnown RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TTC7BQ86TV6 843 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TSPAN33Q86UF1 283 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 SLC41A1Q8IVJ1 513 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 STK40Q8N2I9 435 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 PNPLA1Q8N8W4 532 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 HCAR2Q8TDS4 363 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 PBXIP1Q96AQ6 731 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 MAGEB18Q96M61 343 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 THAP10Q9P2Z0 257 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 B4GALT6Q9UBX8 382 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 PRELID1Q9Y255 219 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 UPK3BL1B0FP48 263 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 UPK3BL2E5RIL1 263 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 PHGDHO43175 533 aaKnown RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 NDUFS3O75489 264 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 PIM1P11309 404 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 CYP2A6P11509 494 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 ETV4P43268 484 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TTPAP49638 278 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TAS2R39P59534 338 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 RAB10P61026 200 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 XIAPP98170 497 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 PEX6Q13608 980 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 ARHGEF7Q14155 803 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 SEMA3AQ14563 771 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 KPNB1Q14974 876 aaKnown RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 CCDC85BQ15834 202 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 LIN52Q52LA3 116 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 RBM20Q5T481 1227 aaKnown RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 C9orf64Q5T6V5 341 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 DEPDC1Q5TB30 811 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 LRRC66Q68CR7 880 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 DSG4Q86SJ6 1040 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 C11orf74Q86VG3 221 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 CBARPQ8N350 705 aaPredicted RBP8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TSPAN17Q96FV3 270 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 TSNARE1Q96NA8 513 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 OMDQ99983 421 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 P2RY13Q9BPV8 354 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 SIKE1Q9BRV8 207 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 CRYL1Q9Y2S2 319 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 ACOT9Q9Y305 439 aa8.03□□□□□ -1.12
CCDC39-201ENST00000442201 UBA6A0AVT1 1052 aaPredicted RBP8.02□□□□□ -1.12
CCDC39-201ENST00000442201 C2CD4DB7Z1M9 353 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 MBTPS2O43462 519 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 DHRS4L1P0CG22 281 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 PRSS56P0CW18 603 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 IL12RB1P42701 662 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 GALK1P51570 392 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 PTPN5P54829 565 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 ADARP55265 1226 aaKnown RBP8.02□□□□□ -1.12
CCDC39-201ENST00000442201 SEMG2Q02383 582 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 CACNG1Q06432 222 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 LRRC73Q5JTD7 316 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 EGFLAMQ63HQ2 1017 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 FAM45BPQ6NSW5 357 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 TAS2R42Q7RTR8 314 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 CPLX4Q7Z7G2 160 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 LONP2Q86WA8 852 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 PIANPQ8IYJ0 282 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 MYO1HQ8N1T3 1032 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 ESX1Q8N693 406 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 TMIEQ8NEW7 156 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 FAM45AQ8TCE6 357 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 GFM2Q969S9 779 aaKnown RBP8.02□□□□□ -1.12
CCDC39-201ENST00000442201 TPK1Q9H3S4 243 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 FBRSL1Q9HCM7 1045 aaKnown RBP8.02□□□□□ -1.12
CCDC39-201ENST00000442201 CACNA2D2Q9NY47 1150 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 ANKRD6Q9Y2G4 727 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 VWA7Q9Y334 891 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 STARD13Q9Y3M8 1113 aa8.02□□□□□ -1.12
CCDC39-201ENST00000442201 GLYATL1P3A0A0U1RQE8 302 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 C16orf96A6NNT2 1141 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 SRP72O76094 671 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms