RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SIKE1Q9BRV8 207 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MLPHQ9BV36 600 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 SPATA16Q9BXB7 569 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 RAB6BQ9NRW1 208 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MARK1Q9P0L2 795 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 FTSJ1Q9UET6 329 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TAGLN3Q9UI15 199 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ADAMTS6Q9UKP5 1117 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC27A6Q9Y2P4 619 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 INPP4BO15327 924 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 HRO43593 1189 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 GLDCP23378 1020 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 RPS21P63220 83 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 NSUN2Q08J23 767 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 C1orf61Q13536 156 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 UBAP2LQ14157 1087 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 PTK2BQ14289 1009 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 GSTA3Q16772 222 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 PLK5Q496M5 336 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRRC8BQ6P9F7 803 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 PHACTR4Q8IZ21 702 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 SCML4Q8N228 414 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 DEFB124Q8NES8 71 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 C1orf74Q96LT6 269 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 NR1H4Q96RI1 486 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 IL37Q9NZH6 218 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 PKD2L2Q9NZM6 624 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 C1orf232A0A0U1RR37 186 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 H0Y3Z8 333 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 ATP9BO43861 1147 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 PENKP01210 267 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 AMD1P17707 334 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 HTR7P34969 479 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 GMPRP36959 345 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 PLA2G5P39877 138 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 IDH3AP50213 366 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 DUSP3P51452 185 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 IRX4P78413 519 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 IRX1P78414 480 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 TBCCQ15814 346 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 INSCQ1MX18 579 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 SNAP47Q5SQN1 464 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 C4orf22Q6V702 233 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 RAPH1Q70E73 1250 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRRC49Q8IUZ0 686 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 GALNT15Q8N3T1 639 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 MINDY1Q8N5J2 469 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 ARMC2Q8NEN0 867 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 ACTRT2Q8TDY3 377 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZNF184Q99676 751 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC39A8Q9C0K1 460 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 TM7SF3Q9NS93 570 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 STOML1Q9UBI4 398 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZC3H7BQ9UGR2 993 aaKnown RBP7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 FZD10Q9ULW2 581 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 DNAJC16Q9Y2G8 782 aa7.34□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZCWPW2A0A1B0GU75 182 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 A0A1W2PQ67 120 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 C2orf81A6NN90 581 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 C16orf96A6NNT2 1141 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZBTB14O43829 449 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 FYNP06241 537 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 SRCP12931 536 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 PBLDP30039 288 aaPredicted RBP7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 NR2C2P49116 596 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 SERPINH1P50454 418 aaKnown RBP7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 NDST2P52849 883 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 AP1S1P61966 158 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMPRSS15P98073 1019 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 CDC16Q13042 620 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 CHI3L2Q15782 390 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 PRRT3Q5FWE3 981 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 RNF220Q5VTB9 566 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 GATAD2AQ86YP4 633 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 CHST14Q8NCH0 376 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 PRSS33Q8NF86 280 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 CLDN23Q96B33 292 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF419Q96HQ0 510 aaPredicted RBP7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 APOL2Q9BQE5 337 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 THAP1Q9NVV9 213 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 SPAG17Q6Q759 2223 aa7.34□□□□□ -1.24
CDC42BPA-208ENST00000442054 CHD5Q8TDI0 1954 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SHROOM3Q8TF72 1996 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 GYG2O15488 501 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 LYPLA1O75608 230 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 ANXA9O76027 345 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 EFEMP2O95967 443 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 SMIM18P0DKX4 95 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 BCKDHBP21953 392 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 CD86P42081 329 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 AQP5P55064 265 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 HNRNPKP61978 463 aaKnown RBP eCLIP7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 KLC1Q07866 573 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PEX6Q13608 980 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 KIAA0895LQ68EN5 471 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 AAGABQ6PD74 315 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 EPGNQ6UW88 154 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 PACS1Q6VY07 963 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 WDR5BQ86VZ2 330 aa7.33□□□□□ -1.24
CDC42BPA-208ENST00000442054 TRAPPC5Q8IUR0 188 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms